Gene Bpro_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2341 
Symbol 
ID4014994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2439106 
End bp2440323 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID637942009 
Productextracellular ligand-binding receptor 
Protein accessionYP_549162 
Protein GI91788210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.840598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTA CGAAATCTGC CATGTTTGGC AGTCTGTTGT TGGCGTTGGC TACCGCGGTG 
TTGGCCCAAG CCGGCTCGAA GCCGCCGATC AAAATCGGCG AAATCAACAG CTACTCGACC
ATTCCGCAGT TCACCCAGCC CTATCGCCAG GGCTGGCAGC TCGCCGTGGA AGAGGTCAAT
GTGGCAGGCG GGCTGCTGGG GCGCAAGGTG GAGGTGATTG CGCGGGACGA TGCCGGCAAG
CCAGAGGAGG CGCTGCGCCA TGCCATCGAG TTGACATCGA AGGAAAAAGT GGATGTTCTG
GCCGGTGGCT TCCTGTCCAA TGTGGGCCTG GCACTGGCCG ATCACGCACA GAAAAACAAG
AGGGTGTATG TGGCCAGCGA GCCGCTGACC GACGCCCTGG TGTGGGACAA GGGTAACCGC
TACACCTTCC GCCTGCGCCC CAGTACTTAT ATGCAGGCTG CCATGCTGGT CGAAGAGGCG
GCCAAGCTGC CCGCCAGGCG CTGGGCTACC ATCGCCCCCA ACTATGAGTA TGGGCAGAGC
GCTGTCGCCA GCTTCAAGGA GCTGCTCAAG GCCAGGCGGC CGGATGTGGA GTTTGTGGGT
GAGCAGTGGC CGGCGCTGGG CAAGCTGGAT GCCGGCACCA CGCTGCAGGC CACCATGCAG
AGCAAGCCCG ACGCCATCTT CAATGTGACC TTCGGCGCCG ATCTGGCAAA GCTGGTCCGG
GAAGGCAACC AACGCGGCAT TTTCCCCAAG ACGCCAGTGG TGTCCCTGCT TTCGGGCGAG
CCCGAGTACC TGGATGTACT AAAAGATGAA ACGCCCAAGG GCTGGATCGT GACCGGCTAC
CCCTGGGACC AGATCGATTC GCAGGAGCAC GCCAGTTTTG CGGCCAATTA CTACCGACGC
TTCAATGAGT ACCCCAAGGT GGGCTCGGTG GTGGGCTATG CCACCATGCA GGCCATTTTT
GCAGCAATCA AAAAAGCCAA CTCCACCGAC AACGAGAAGC TGGTGACGGC CCTGCGTGGC
CTGAAGTTCT CCACACCGTT TGGCCCGGCC GAATTCCGGG CGCTGGATCA CCAGTCCACC
ATGGGGGCCT ACGTGGGCAA GCTCGACCTG CGTGGTCACA AGGGCACGAT GGTGCAGTGG
CGCTATGCGG ATGGCAAGGC TTATTTGCCC AGCGATGCCT ATGTCAAGGC ACGTCGTCCG
CCTGATGCCA TGAAGTGA
 
Protein sequence
MKSTKSAMFG SLLLALATAV LAQAGSKPPI KIGEINSYST IPQFTQPYRQ GWQLAVEEVN 
VAGGLLGRKV EVIARDDAGK PEEALRHAIE LTSKEKVDVL AGGFLSNVGL ALADHAQKNK
RVYVASEPLT DALVWDKGNR YTFRLRPSTY MQAAMLVEEA AKLPARRWAT IAPNYEYGQS
AVASFKELLK ARRPDVEFVG EQWPALGKLD AGTTLQATMQ SKPDAIFNVT FGADLAKLVR
EGNQRGIFPK TPVVSLLSGE PEYLDVLKDE TPKGWIVTGY PWDQIDSQEH ASFAANYYRR
FNEYPKVGSV VGYATMQAIF AAIKKANSTD NEKLVTALRG LKFSTPFGPA EFRALDHQST
MGAYVGKLDL RGHKGTMVQW RYADGKAYLP SDAYVKARRP PDAMK