Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2341 |
Symbol | |
ID | 4014994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2439106 |
End bp | 2440323 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637942009 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_549162 |
Protein GI | 91788210 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.840598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTA CGAAATCTGC CATGTTTGGC AGTCTGTTGT TGGCGTTGGC TACCGCGGTG TTGGCCCAAG CCGGCTCGAA GCCGCCGATC AAAATCGGCG AAATCAACAG CTACTCGACC ATTCCGCAGT TCACCCAGCC CTATCGCCAG GGCTGGCAGC TCGCCGTGGA AGAGGTCAAT GTGGCAGGCG GGCTGCTGGG GCGCAAGGTG GAGGTGATTG CGCGGGACGA TGCCGGCAAG CCAGAGGAGG CGCTGCGCCA TGCCATCGAG TTGACATCGA AGGAAAAAGT GGATGTTCTG GCCGGTGGCT TCCTGTCCAA TGTGGGCCTG GCACTGGCCG ATCACGCACA GAAAAACAAG AGGGTGTATG TGGCCAGCGA GCCGCTGACC GACGCCCTGG TGTGGGACAA GGGTAACCGC TACACCTTCC GCCTGCGCCC CAGTACTTAT ATGCAGGCTG CCATGCTGGT CGAAGAGGCG GCCAAGCTGC CCGCCAGGCG CTGGGCTACC ATCGCCCCCA ACTATGAGTA TGGGCAGAGC GCTGTCGCCA GCTTCAAGGA GCTGCTCAAG GCCAGGCGGC CGGATGTGGA GTTTGTGGGT GAGCAGTGGC CGGCGCTGGG CAAGCTGGAT GCCGGCACCA CGCTGCAGGC CACCATGCAG AGCAAGCCCG ACGCCATCTT CAATGTGACC TTCGGCGCCG ATCTGGCAAA GCTGGTCCGG GAAGGCAACC AACGCGGCAT TTTCCCCAAG ACGCCAGTGG TGTCCCTGCT TTCGGGCGAG CCCGAGTACC TGGATGTACT AAAAGATGAA ACGCCCAAGG GCTGGATCGT GACCGGCTAC CCCTGGGACC AGATCGATTC GCAGGAGCAC GCCAGTTTTG CGGCCAATTA CTACCGACGC TTCAATGAGT ACCCCAAGGT GGGCTCGGTG GTGGGCTATG CCACCATGCA GGCCATTTTT GCAGCAATCA AAAAAGCCAA CTCCACCGAC AACGAGAAGC TGGTGACGGC CCTGCGTGGC CTGAAGTTCT CCACACCGTT TGGCCCGGCC GAATTCCGGG CGCTGGATCA CCAGTCCACC ATGGGGGCCT ACGTGGGCAA GCTCGACCTG CGTGGTCACA AGGGCACGAT GGTGCAGTGG CGCTATGCGG ATGGCAAGGC TTATTTGCCC AGCGATGCCT ATGTCAAGGC ACGTCGTCCG CCTGATGCCA TGAAGTGA
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Protein sequence | MKSTKSAMFG SLLLALATAV LAQAGSKPPI KIGEINSYST IPQFTQPYRQ GWQLAVEEVN VAGGLLGRKV EVIARDDAGK PEEALRHAIE LTSKEKVDVL AGGFLSNVGL ALADHAQKNK RVYVASEPLT DALVWDKGNR YTFRLRPSTY MQAAMLVEEA AKLPARRWAT IAPNYEYGQS AVASFKELLK ARRPDVEFVG EQWPALGKLD AGTTLQATMQ SKPDAIFNVT FGADLAKLVR EGNQRGIFPK TPVVSLLSGE PEYLDVLKDE TPKGWIVTGY PWDQIDSQEH ASFAANYYRR FNEYPKVGSV VGYATMQAIF AAIKKANSTD NEKLVTALRG LKFSTPFGPA EFRALDHQST MGAYVGKLDL RGHKGTMVQW RYADGKAYLP SDAYVKARRP PDAMK
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