| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2306 |
|---|
| Symbol | |
|---|
| ID | 4015034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2401443 |
|---|
| End bp | 2401853 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637941973 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_549127 |
|---|
| Protein GI | 91788175 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5478] Predicted small integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00866785 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATAACC ACGCCTGGTA CTCCCGGTTT GCGAAGGCTG CGGCGCATTT CTGTGGCCGG
CCCAGAGTGT TTGTCCTTGC CGTGGCCATC ATCGCCGTCT GGGTAGTGAC CGGGCCCCTG
TTCGGCTTCA GTGACACCTG GCAATTGGTC ATCAACACCG GCACCACGAT CATCACCTTC
CTGATGGTCT TCCTGATTCA GAACACCCAA AACCGGGATA CGGAGGCCAT CCAGGTGAAA
CTCGATGAAC TCATTCGTGC AACCCAGGGG GCGCATAACG CTCTTCTCGA TCTGGAAGAA
CTGGAAGAGG AGGATCTCGA CGCATTCAGA ACCCGGTATG AAGCACTTGC AACGGCAGCG
AGGGTGGAGT TAAAGCGTGG ATTACAGGAC ACCGGAACGC CAGAGCCCTG A
|
|---|
| Protein sequence | MHNHAWYSRF AKAAAHFCGR PRVFVLAVAI IAVWVVTGPL FGFSDTWQLV INTGTTIITF
LMVFLIQNTQ NRDTEAIQVK LDELIRATQG AHNALLDLEE LEEEDLDAFR TRYEALATAA
RVELKRGLQD TGTPEP
|
|---|
| |