Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2278 |
Symbol | |
ID | 4015045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2368712 |
End bp | 2370115 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637941946 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_549100 |
Protein GI | 91788148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGGC AAGCGCCTGC GCCGGCGCAG GAGCCCGACC TCAAGCCGCT GATCCCCAAC GGTCCACTGC AGGCCATCAC GCCGGGCCAA GCCGGCTCGC ACCAGATTGC GTCCACCGAG CCGCCCAGGG AGTTGTGGGA CCGGATTCGC CGCGGCTTTG CCATGCCCAA CCTGCAAAAC GAACTGGTGA CTGACCGTGA GCAGTGGTAT GCCAGCCGGC CCGACTACAT CCAGCGCATG ACCGAGCGCT CCAGCAAGTA TCTCTTTCAT ATTGTTGAAG AGCTGGAGCG CCGCCAGATG CCTACCGAAC TGGCCCTGTT GCCCTTCATT GAGAGCGCCT TTAACCCCCA GGCCGTTTCC AGCGCCAAGG CCGCCGGGAT GTGGCAGTTC ATGCCCGCCA CGGGCAAGTA CTTTGACCTG AAGCAAAACG CTTTTCGCGA TGACCGCCGC GATGTTCTGG CCTCGACCCG GGCGGCGCTG GATTACCTGC AAAAGCTCTA CGGCATGTTT GGTGACTGGC ACCTGGCGCT GGCCGCCTAC AACTGGGGTG AAGGCAGCGT GGGCCGCGCG ATCGCCAAAA ACCAGAGGGC CGGCCTGGGC ACCAGTTACC TCGACCTCAA CATGCCGGCG GAGACCCGGC TTTACGTGCC CAAGCTGCAG GCCGTGAAAA ACATCGTGGC GAACCCGCAG GGGTTCGGCA CGGAACTGCC GCTGATCGAA AACCACCCCT ATTTCCAGCA GGTGATGATC ACGCGCGACA TCGATGTGAC CCTGGCCGCA CGGCTGGCCG ATGTCAAGCT TGAAGACTTC AAGGCGCTCA ATCCCTCGGC CCATCGCCCG GTCATCATCG CGGCTGGCAC GCCCCACATC TTGCTGCCCT GGGACAATGC CATCGTCTTT CAACGCAATT TTGACGCCTA CACCCAGGGC CAATATGCCA GCTGGACCGC ATGGACAGCC CCGACAACCA TGAGTCCGGC CGAGGCAGCG CGACGCACCG GAATGAGCGA GACCGATCTG CGCAGCGTGA ACAACATACC ACCGCGCATG TTGATCAAGG CAGGCTCCAC CCTGCTGGTG CCGCGATCGG CAAAAATGGA AAATGACGTG ACAGGCCACC TGGCCGACAG CGCTCAGGTT TCATTGGCGC CTGAAATGGT CACGCGGCGT ACCACCGTCA AGGCACGCAA AGGTGAATCA GTCGCCACCA TCGCCAGGCG CTACAAATTG AGCGCGGCCA GCGTGGCTGA ATGGAATGGC GTCAGTGCTT CTGCCGCCTT CAAGCTGGGG CAACAGGTGG TTGTGTTCTT GCCGGTCAAG AGCCGTGCTT CCTCCGGGCG CAGCAATGTC AAAGCCGTCA AGCGCAGCAC CAGCAAGACC ATTGTCAAGT CGCGAAGACG CTGA
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Protein sequence | MTGQAPAPAQ EPDLKPLIPN GPLQAITPGQ AGSHQIASTE PPRELWDRIR RGFAMPNLQN ELVTDREQWY ASRPDYIQRM TERSSKYLFH IVEELERRQM PTELALLPFI ESAFNPQAVS SAKAAGMWQF MPATGKYFDL KQNAFRDDRR DVLASTRAAL DYLQKLYGMF GDWHLALAAY NWGEGSVGRA IAKNQRAGLG TSYLDLNMPA ETRLYVPKLQ AVKNIVANPQ GFGTELPLIE NHPYFQQVMI TRDIDVTLAA RLADVKLEDF KALNPSAHRP VIIAAGTPHI LLPWDNAIVF QRNFDAYTQG QYASWTAWTA PTTMSPAEAA RRTGMSETDL RSVNNIPPRM LIKAGSTLLV PRSAKMENDV TGHLADSAQV SLAPEMVTRR TTVKARKGES VATIARRYKL SAASVAEWNG VSASAAFKLG QQVVVFLPVK SRASSGRSNV KAVKRSTSKT IVKSRRR
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