| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2260 |
|---|
| Symbol | |
|---|
| ID | 4015102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2347202 |
|---|
| End bp | 2349052 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637941929 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_549083 |
|---|
| Protein GI | 91788131 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.991842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGCGAA AATCGCTATC CAGCCCTCCT GCGGGCATCT CTCCTGATCA CCAAGCCGTT
TTGAACAAGC CTTCGCCCGC CATCATTGCC CAGTCTGCCG TGCGCCGCCT GCCGCGGCTG
GCGCTGTTGC TGTTTTGCCT GGCTTATGTG CTGCCCGGAT TTTTTGGCCG CGGCCCCTGG
AAATACGAGG ACATCGCCGC CTTCGGCGTC ATGCGGGAGC TGACGACCTC CGCGGCCAAC
TGGCTGCAGC CTCAATTGCT CGGCCAGATC ACGGGGTTTG AGGCGCTGGT GCCTTATTGG
CTGGGGGCCG TCGCCATCAA GGGCCTGCCC TTCCTGGACC CGGCTTTTGC GGTACGCATT
CCGTTTGGCC TGCTGCTGGC GATGACGCTG ATCACCACCT GGTACGCCAT CTACTATCTG
GCCCGCAGCC CGCAGGCTCA GCCCGTGGCC TTTGCCTTTG GCGGCGAAGC CAGCCCGGTG
GACTACGCCC GGGCCATTGC AGACGCCGGT TTGCTGGCGC TGATTGCCAG CCTGGGCCTG
GCACAGTTGT CACACGAGAC GACGCCCGCG CTGGCGCAAC TGGGCTTTAC GGCCCTGGTG
TTTTATGCGA TGTCTGCCAG CCCCTATCGC CGGGCAACCA AAATTGTGGG TCCGGCACTG
GGCTTGTTGA TTGGTCTCGC AGGACTTGCC CTGAGTGGCG CGCCCACACT GGCCCTGCTG
CTGGGTGTGG GCGGCGTACT GGTCGAAGGG GCTCAACTTC ACTGGGGCTA CAACCAGGAT
GGCCAGGGCA GTCAGGCCAA CACTGACAGC AGACGGCAGT CCTGGCATTG GGTGCTGCTG
ATTGCCGGCG CCACGCTACT GGCCGCACTG CTGGCGTATG CGCTGGACCT GTGGCGCTGG
CGAATTCAGC TGCCCGGCGC CAGTGATCAA CCAGCCTGGA GAGACTGGCG CCGGCTAGGG
CGTTTGCTAC TGTGGTTTAC CTGGCCAACC TGGCCGCTGG CGCTGTGGAC GCTGTGGCGC
TGGCGCAGGC AACTGGCCAG CCGCCACGTT GCCCTGCCCT TGTGGTTTGC CGGCATGGCT
GTCGCCGCCA CGCTGACCAC CACTGCCTCC GACCGCAGTC TGCTGCTGAG CTTGCCGCCG
CTGGCGGCAC TGGCCGCGTT TGCCCTGCCA ACGCTCAAGC GTAGCTGGGC CTCGCTGATT
GACTGGTTCA CCCTGCTCTT TTTTACGGGC TGCGCCATCA TCATCTGGGT CGTCTGGATT
GCCATGCAGA CCGGCGTGCC GCGGCAGCCC GCGGCCAATG TTGCCAAGCT GGCGCCGGGC
TTCGAACCGA GCTTTTCGTG GCTTGCTTTT TTGGCAGCGG TGGCCGCCAC GCTGGCCTGG
ACCTGGCTCG TCAAGTGGCG GGCCGGCGCA CAGCGCGCAG CCATCTGGAA GTCGCTGGTC
CTGCCGGCCG GCGGCGCCAC CCTCTGCTGG CTGCTGCTGA TGACACTCTG GATGCCCCTG
CTCGACTATG CGCGCAGCTA TGCGCCGATG TCGCGGCAGA TCGCCAGCCT GGTTGACAAA
AATGCCTGTG TCGAGATCTA TGGCGTGGAC AGCGCCCAGG CTGCTGCGCT GCAGTACCAC
GGCCGGCTGG AACTGCGCCA GGCGACCTCC CATGCAAGCT GTCCTTATCT GGTCGTCGAT
GTCGATGCCC AGTCGACCCT CAGCAACACC GTCAATTTGC CGGACTGGGC GTTCCTGGCC
ACCGTGCGCA GACCGACGGA CAAAAATGAG AACGTCCTGG TTTTCAAACG GGTCAGCACG
GATAACCAGG CCCGGGCGGC AAAGCGAGAC GGTCTGCCCG CCCGCCCTTG A
|
|---|
| Protein sequence | MPRKSLSSPP AGISPDHQAV LNKPSPAIIA QSAVRRLPRL ALLLFCLAYV LPGFFGRGPW
KYEDIAAFGV MRELTTSAAN WLQPQLLGQI TGFEALVPYW LGAVAIKGLP FLDPAFAVRI
PFGLLLAMTL ITTWYAIYYL ARSPQAQPVA FAFGGEASPV DYARAIADAG LLALIASLGL
AQLSHETTPA LAQLGFTALV FYAMSASPYR RATKIVGPAL GLLIGLAGLA LSGAPTLALL
LGVGGVLVEG AQLHWGYNQD GQGSQANTDS RRQSWHWVLL IAGATLLAAL LAYALDLWRW
RIQLPGASDQ PAWRDWRRLG RLLLWFTWPT WPLALWTLWR WRRQLASRHV ALPLWFAGMA
VAATLTTTAS DRSLLLSLPP LAALAAFALP TLKRSWASLI DWFTLLFFTG CAIIIWVVWI
AMQTGVPRQP AANVAKLAPG FEPSFSWLAF LAAVAATLAW TWLVKWRAGA QRAAIWKSLV
LPAGGATLCW LLLMTLWMPL LDYARSYAPM SRQIASLVDK NACVEIYGVD SAQAAALQYH
GRLELRQATS HASCPYLVVD VDAQSTLSNT VNLPDWAFLA TVRRPTDKNE NVLVFKRVST
DNQARAAKRD GLPARP
|
|---|
| |