| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2259 |
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| Symbol | |
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| ID | 4015101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2345838 |
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| End bp | 2347205 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941928 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_549082 |
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| Protein GI | 91788130 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.96964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGAAC TCAAAATCAT CAGCCAGCAC GCGGGTACGG TGCTGGTGGG TCAGCTGGCC
GTGATGGCCT TTGGCGTGGC AGACACCGTG ATTGCCGGGC GCTACAGCGA CGAGGCCCTG
GCTGCGCTGT CGGTAGGCTC CGCCATCTAC ATCAGTGTTT ACGTCGGGCT GATTGGCATT
GTCCAGGCCC TGCTCCCCAT CTGGGCCGAG ATGCGGGGTG CCCGACAGTA TGAGGCGGTC
GGACAATCCT TGCGGCAAAG TCTTTACCTG TGCAGCTTCA TCACGGCCGC CGGCATGGCT
GCCCTGCTGT TTCCCGGCCC GCTGCTGCGC TGGGCACAGG TGCCCGAACT GATGCAGGAT
GACGTGCGGC ACTACCTCGC CATTCTGGCC TTCGGGTTTG TTCCCTCGCT GCTGTTCCGG
GTTTACAGCA CGTTCAACCA GTCCCTGGGA AAACCGCTGC TGGTCACCTG GCTGCAGGTA
GGCGCGTTGG CGCTCAAAAT CCCGCTGTCC ATCTGGCTGG TGGCTGGCGG TGGCGGCGTG
GAGCCCATGG GTGTCGCCGG CTGCGCCTTG GCCACGCTGA TCGTGAACTA CCTGCTTCTG
GTGCTGGCGC TGGTGATGCT GCGCTCACAA GCGCTATACA GGCCGTTTTG CATCTGGCGG
CGCATGGAGC GTCCCGACTG GCCGCAGATT CGCGGCTTTG CCCGGCTGGG TATCCCCGGT
GGGCTGGCCT ATCTGGTGGA AGTGACCTCC TTCACACTGA TGGCCCTGTT CATCGCGCGA
TTGGGAACGA CGGCCTCGGC GAGCCACCAG ATCGCGGCCA GCGTGGCGGC GGTGCTTTAC
ATGATGCCGC TGTCCATGGC CATTGCCTGC AGTGCGCGCG TATCGTTCTG GCTGGGTGCG
GAACGGCCGG ACTACGCCAG GCGGGTGGTC GTGCTGGGCC TGAAACTCAC AGGGCTGGCG
GCCCTGGTAC TGGCTGCGAC TATTTCGGTA GCAGGGAAGC TGCTGGCAAG CTGGTATTCC
GGCAGCCCAG CGATCATTTC CCTGGCGTCG TCCCTGCTGG TGTGGGTGGC TTTTTACCAC
GTCGCCGATG CCACCCAGGC ACTGTGCGCC TTCTTGCTGC GCTGCTACCG CATCACGCTC
ACGCCACTGG TACTGTATGG AATTTTCCTG TGGGGGCTGG GCCTGTTTGG CGGTTACCTG
CTGGCCTACG AAGGTATCGC GGGCCGTGCC GCCACCCAAT CGGCCAGCAG CTTCTGGGCT
GCCAGCACCA TCGCGATCGG ACTGGCAGCC GCCTGCCTCC TGGGGTTGCT GTGGCGCGTG
GTTTGGCAGA GCCAGCGGGC CATCCCGGGG AAAACTCAGG CAGCGTGA
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| Protein sequence | MSELKIISQH AGTVLVGQLA VMAFGVADTV IAGRYSDEAL AALSVGSAIY ISVYVGLIGI
VQALLPIWAE MRGARQYEAV GQSLRQSLYL CSFITAAGMA ALLFPGPLLR WAQVPELMQD
DVRHYLAILA FGFVPSLLFR VYSTFNQSLG KPLLVTWLQV GALALKIPLS IWLVAGGGGV
EPMGVAGCAL ATLIVNYLLL VLALVMLRSQ ALYRPFCIWR RMERPDWPQI RGFARLGIPG
GLAYLVEVTS FTLMALFIAR LGTTASASHQ IAASVAAVLY MMPLSMAIAC SARVSFWLGA
ERPDYARRVV VLGLKLTGLA ALVLAATISV AGKLLASWYS GSPAIISLAS SLLVWVAFYH
VADATQALCA FLLRCYRITL TPLVLYGIFL WGLGLFGGYL LAYEGIAGRA ATQSASSFWA
ASTIAIGLAA ACLLGLLWRV VWQSQRAIPG KTQAA
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