Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2251 |
Symbol | |
ID | 4015093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2338391 |
End bp | 2338873 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637941920 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_549074 |
Protein GI | 91788122 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.206889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAT TCCGCATTCT TCTCGTCGCC ACAACCGTTG CCGCCCTCGC CGGCTGCGCT ACTTCCAGCG CCCCGGTATC GGTAGCGGAC ACCATCGCCG CCAAACCGCA ATTGAGCACC CTCACCAGCC TGGTCGCCAA ATCAGGACTG ACGGACACCC TCAAGGGTAC GGGCCCTTTT ACCGTCTTCG CGCCTACCAA TGAGGCCTTC GCCAAGGTTC CGGCAAAAAC CATGGACGAT CTTGCCAAGG ATCCGGCCAA ACTCAAGGCC GTGCTGACCT ACCACGTACT GCCCGTCAAG GTCATAGCCG CCGACGTCAA GAATGGCAAC AGCAAAACCG TCAACGGCGC CAATGTGGCA ATCTCCAGAG CGGGCGATTT TGTCACGGTG GAAGAAGCCA TGGTTCAAAC CGCTGATATT TCTGCGACCA ACGGTATGGT GCATATCGTC GACAGCGTTT TGATTCCTCC TGCGAAGCGC TAA
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Protein sequence | MPKFRILLVA TTVAALAGCA TSSAPVSVAD TIAAKPQLST LTSLVAKSGL TDTLKGTGPF TVFAPTNEAF AKVPAKTMDD LAKDPAKLKA VLTYHVLPVK VIAADVKNGN SKTVNGANVA ISRAGDFVTV EEAMVQTADI SATNGMVHIV DSVLIPPAKR
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