| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2249 |
|---|
| Symbol | |
|---|
| ID | 4015091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2335539 |
|---|
| End bp | 2337038 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637941918 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_549072 |
|---|
| Protein GI | 91788120 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG GAACACTGCT CGCGGCTGTA GATCTGGGAT CCAACAGTTT TCGCCTTGAA
ATTGGCCGCC TTGATCATGG CCGGGTCCAC CGCACGGAAT ACATCAAGGA AACGGTCCGC
CAGGGCAACG GACTGGACGG CGACCGCAAC CTGACGCCGG ACGCCATGCA GCGCGGCTGG
GACTGCCTGG CCCGCTTCGC CGAACGGCTG GCCGGGTTCA AAAAAACGCA GGTCAGGGCC
GTCGCCACGC AAACCTTGCG GGAGGCACGC AACCGGGAAG AATTTCTGGC GCAGGCCTTC
CGGATTCTGG AATTCCCCAT TGATGTCATT TCAGGCAGCG AAGAAGCCCG ACTGATTTAC
CAGGGTGTGG CCCATCTGCT GCCCCAGTCG GATGAGCGCC GGCTGGTTGT GGACATTGGG
GGCCGCTCCA CAGAAATGAT CCTGGGCAAG GGCTTCGATG CACGCACGAT GGAGTCCTAC
CGCGTCGGCA GCGTGGCTTG GTCCATGAAG TACTTTCCGG ACGGCCAGTT CACGCCGCGG
GCTTTCGAGA TGGCTGAAAT TGCGGCCAAA GCGGTGCTTG ATGAAGCGGT CAATGCCTAC
CAGCCGGGCG TCTGGGATGT CGCCTATGGT TCGTCCGGCA CGATTGGCGC CGTCAGCGAT
GTACTGACTG CCGCGGGCTG GCCTGCCGGC CTTGTCACGC GTGATGGCCT CGACTGGCTG
CTCGATCGCC TGCTCAAGGC GCAACATGCC GACCGCGTGA AGCTCGACGG CATGAAAGAT
GACCGGCGCG CCGTCATTGG CGGTGGCGTC AGCGTGCTGA GGGCTGTGTT CGGGCTGCTG
GGCATTGAAC AGATGGAAGC CGCCCAGGGC GCGCTGCGCC ACGGCGTTCT TTATGACCTC
CTCGACCGGG AGCAGGACTC CACCGATTTG CGCTCAACCA GCGTCCAGCG CCTGGCGAGC
AAATTCAACT CAGATGCAGC ACAGGCCCAG CGGGTCAGCA GAGTTTCGCA GCACCTGTTC
CGGATGGCTG GCGCAGGCCT CCCAGGCGAG GCACTGGAGC GTTTCCAGCG CAAGCTGCAG
TGGGCTGCGC AGCTTCATGA GATTGGCAGC CAGATTTCAC ACAGCGACTA CCACAAGCAT
GGCGCCTATA TTCTGGACAA CGCCGACGCG CCCGGTTTTG CGCTCCCCGA GCTGCACCGG
CTGAGCCTGC TCGTGCTGGG TCATCGCGGG AAACTGCGCA AGCTGGAAGT TGACTTCGAA
GACCGGGTGT TTGTCCAGCA ACTGCTGTGC CTGCGCATGG CGGTCATTTT GTGCCACGCC
CGGCGAGACC CTGACCTCAA GGGACTGCAA CTCGAATGCA GCGCGGAACC CGGCAGGATT
TTTGTGCTGA ACTGCAGGCC GGGCTGGGCT GAAGCCTTTC CTCAATCGGC GCACTTGCTG
CGCGAAGAAG TGCTGGCCTG GCAAAAAACG CCATGGACCC TGATTGTCTC CGGTCTGTAG
|
|---|
| Protein sequence | MQNGTLLAAV DLGSNSFRLE IGRLDHGRVH RTEYIKETVR QGNGLDGDRN LTPDAMQRGW
DCLARFAERL AGFKKTQVRA VATQTLREAR NREEFLAQAF RILEFPIDVI SGSEEARLIY
QGVAHLLPQS DERRLVVDIG GRSTEMILGK GFDARTMESY RVGSVAWSMK YFPDGQFTPR
AFEMAEIAAK AVLDEAVNAY QPGVWDVAYG SSGTIGAVSD VLTAAGWPAG LVTRDGLDWL
LDRLLKAQHA DRVKLDGMKD DRRAVIGGGV SVLRAVFGLL GIEQMEAAQG ALRHGVLYDL
LDREQDSTDL RSTSVQRLAS KFNSDAAQAQ RVSRVSQHLF RMAGAGLPGE ALERFQRKLQ
WAAQLHEIGS QISHSDYHKH GAYILDNADA PGFALPELHR LSLLVLGHRG KLRKLEVDFE
DRVFVQQLLC LRMAVILCHA RRDPDLKGLQ LECSAEPGRI FVLNCRPGWA EAFPQSAHLL
REEVLAWQKT PWTLIVSGL
|
|---|
| |