| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2206 |
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| Symbol | |
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| ID | 4015126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2302973 |
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| End bp | 2304271 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637941877 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_549031 |
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| Protein GI | 91788079 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.735161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCG GAATCCTCGT TCTTGTTCTC GTGCTGGTGG CCGGCATGCT GCTGCGCATG
CCCATCGGTT TTTCGATGCT GGCCTCGGGC ATTGCCTACC TGATGGTCAA GGGGCAGGAC
ATCGGCCTGG TGGCCGAGCA GGTGGGCAAC GGCCTCTACA ACAGCTATGT GCTGCTGGCC
GTGCCGCTCT TCGTGTTTGC GGCCAACATC ATGAACGCCG GCACGGTGAG CGAGCGCATT
TTTGACTTCT GCCGCATCCT GGTCGGGCGC GTGCGCGGCG GCCTGGCGCA AGTGGATATT
CTGGTGAGCG TGGTGTTCTC GGGCATGAGC GGCAGCGCCA TTGCCGACGC CGCCGGGCCC
GGCCTGGTCA CCATTCGCCA GATGCTCAAG AAGCCGGAAT ACACACGCGG CTTTGCGGGT
GCCGTGGTGG TGGCCAGCGC CACACTCGGA CCCATCATTC CGCCTTCCAT TCCCATGGTG
ATTTACGCCC TGGTGTCGGG CGCTTCGGTG GGGGCGCTGT TTCTGGGTGG TGTGGTGCCG
GGCTTTTTGA TGGCATTTTT GATGATGGCA GTGGTGCATT TCATTGCCGT GAAACGCAAC
ATGCCGCGTG AAGACAAAAT TCCGCTGAGT GAATGGCCGA GCATCATCTT TCGCGGCGCC
CTGCCGCTGT CCATGCCCAT CGTGCTGCTC GGTGGCATTT ACTCCGGCGC CTTCACGCCC
ACAGAAGCCG CCGCGGTGGC TGCTTTTCAT GCGCTGGTGC TGGCGGGGGT GGTTTACCGC
GCGCTGACCT GGCGCACCTT CTGGGGCGTG ATCATGGAGT CCACCCGCGG CAGCGCCGTC
ATCACCATGA TCCTGGCCGG CTCCTTCATG CTCAATTACG CATTCACCGC CGAAGGCGTG
CCGCAAGCCA TGGCCACGTG GGTCGACAGC ATGCAGCTCT CGCAGATCAA GTTTTTGCTG
CTGGTCAACG TGATGTTCCT GGTGCTGGGC TGCTTTCTGG ATGTGTCGGT GCTGCTGCTG
GTGTTTGTGC CCATGCTGCT GCCCGCGGCC AAGCTGCTGG GCGTGGACCT GGTGCACTTT
GGCGTGCTGG TGGTGCTCAA CATGATGATC GGCCTGATCC ACCCGCCCTT TGGCATGCTG
CTGTTCGTAA CCAAGGCGCT GACCGGCATC CCGATTGGCG AAATGATGAA AGAAGGCTGG
CATTTCCTGG TCATGCTGCT GCTCTTGCTG CTCGCCATGA CCTGCTTTCC ACAAATTGTG
CTGTGGCTGC CGCAAACCAT GGGCTACGGA GGCAAATAG
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| Protein sequence | MTSGILVLVL VLVAGMLLRM PIGFSMLASG IAYLMVKGQD IGLVAEQVGN GLYNSYVLLA
VPLFVFAANI MNAGTVSERI FDFCRILVGR VRGGLAQVDI LVSVVFSGMS GSAIADAAGP
GLVTIRQMLK KPEYTRGFAG AVVVASATLG PIIPPSIPMV IYALVSGASV GALFLGGVVP
GFLMAFLMMA VVHFIAVKRN MPREDKIPLS EWPSIIFRGA LPLSMPIVLL GGIYSGAFTP
TEAAAVAAFH ALVLAGVVYR ALTWRTFWGV IMESTRGSAV ITMILAGSFM LNYAFTAEGV
PQAMATWVDS MQLSQIKFLL LVNVMFLVLG CFLDVSVLLL VFVPMLLPAA KLLGVDLVHF
GVLVVLNMMI GLIHPPFGML LFVTKALTGI PIGEMMKEGW HFLVMLLLLL LAMTCFPQIV
LWLPQTMGYG GK
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