| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2178 |
|---|
| Symbol | |
|---|
| ID | 4015173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2274360 |
|---|
| End bp | 2275577 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637941848 |
|---|
| Product | cysteine desulfurase IscS |
|---|
| Protein accession | YP_549003 |
|---|
| Protein GI | 91788051 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000963732 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.389244 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC CACACTTTCC GATTTATATG GATTACAGCG CCACCAATCC TTGCGACCCG
AGGGTGGTGG ATGCCATGAT TCCCTGGTTG CGCGAGCATT TCGGCAACCC GGCTTCCCGC
AGCCATGCCT GGGGCTGGGA GGCAGAAGCT GCGGTTGAAA ATGCGCGCGA GCAGGTTGCC
GCACTGATTG GCGCCGATCC GCGCGAAATC GTCTGGACCA GCGGTGCGAC CGAATCCAAC
AATCTGGCGC TGAAAGGCGC CGCCCATTTT TACAAGACCA AGGGCAAGCA CCTCATCACG
GTCAAGACTG AGCACAAGGC TGTGCTTGAT ACCTGCCGCG AACTGGAACG CCAGGGTTTT
GAAGTCACCT ATTTGGATGT GCAGGCCGAT GGCCTGCTTG ACATGGAGGC CCTCAAGGCC
GCCATGCGGC CCGACACCAT TGTGGTCAGC GTCATGTACG TCAACAACGA AATTGGCGTG
ATCCAGGACA TCCCCGCGAT TGGCGCCCTG TGCCGCGAGC GGGGCATTAT TTTCCATGTG
GACGCTGCGC AGGCGACCGG CCGTGTGGAC ATCGACCTGG CGACACTGCC GGTGGACCTG
ATGAGCTTGA CTTCGCACAA AACCTACGGC CCCAAAGGCA TTGGCGCGCT GTATGTGCGC
CGCAAGCCCC GCGTGCGCCT GGAGGCCCAG ATGCACGGCG GAGGCCACGA GCGCGGCATG
CGCTCCGGTA CCTTGCCTAC GCATCAGTGC GTGGGCATGG GCGAGGCCTA CCGCATTGCC
AAAGCAGAGA TGCACGAAGA GAACAAGCGT ATCGCCGCCC TGCACGAGCG CATGCTCAAC
GGCCTCAAGG ATGTGGAGGA AGTGTTCCTC AATGGCCATG CTGAAAAGCG CGTGCCGCAC
AACCTGAACA TGAGCTTCAA TTTCGTCGAG GGCGAGTCGC TGATCATGGG TATCAAGGGC
CTGGCTGTCT CCAGCGGTTC TGCCTGTACC TCGGCCAGTC TGGAGCCCAG TTATGTATTG
CGCGCGTTGG GTCGCAGCGA CGAACTGGCG CACAGCAGCC TGCGCATGAC GATCGGCCGC
TGGAGCACGG AAGAAGAGAT CGATTACGCG GTTGAAACCA TCAAGGAAAA TGTGGCCAAG
CTGCGTGAAC TGTCCCCGCT GTGGGAGATG TTCAAGGATG GGGTTGACCT GTCCACCATC
CAGTGGGCTG CCCACTAG
|
|---|
| Protein sequence | MDTPHFPIYM DYSATNPCDP RVVDAMIPWL REHFGNPASR SHAWGWEAEA AVENAREQVA
ALIGADPREI VWTSGATESN NLALKGAAHF YKTKGKHLIT VKTEHKAVLD TCRELERQGF
EVTYLDVQAD GLLDMEALKA AMRPDTIVVS VMYVNNEIGV IQDIPAIGAL CRERGIIFHV
DAAQATGRVD IDLATLPVDL MSLTSHKTYG PKGIGALYVR RKPRVRLEAQ MHGGGHERGM
RSGTLPTHQC VGMGEAYRIA KAEMHEENKR IAALHERMLN GLKDVEEVFL NGHAEKRVPH
NLNMSFNFVE GESLIMGIKG LAVSSGSACT SASLEPSYVL RALGRSDELA HSSLRMTIGR
WSTEEEIDYA VETIKENVAK LRELSPLWEM FKDGVDLSTI QWAAH
|
|---|
| |