| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2121 |
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| Symbol | |
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| ID | 4015232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2211886 |
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| End bp | 2212938 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637941791 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_548946 |
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| Protein GI | 91787994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.536453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.433175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAC GCCGCACCCT TTTGAAATCC GGTGCCGCCG TGGCCCTGGG CGCACCTGCC
CTGAGCGGCC TGGCCCAGCA GGTCGTCACC CTCAAATTCC ATACCTTCAT GTCCCCGCAG
TCCAACGTCT GGCAGTCCAT GCACAAGCCC TGGATGGAAA AAGTCGAGAA AGAGTCCGGT
GGGCGCATCA AGTTTGAAGC CTACCCCGCC ATGCAACTCG GCGGCACGCC GGTGCAGCTC
TATGACCAGG TCAAGGACGG CGTGGTTGAC GTGGTGTGGA CCCTGCCCGG CAATACCGCC
GGCCGCTTCC CGCGCGTCGA TGTCTTCGAC CTGCCTTTCA TGATGAGCAA CGCCGAGGCC
ACATCCAAAG CCTACTGGGA ATATGTGCAG ACCGTGGCCG TTGACGAGTT CAAGGACACC
CAGGTCCTCG CGCTTCATGT GCACGGCCCC GGCGTGATTC ATACCGTCAA CAAGCCGGTC
AAGTCCATCA ATGACATGCG CGGCCTCAAA CTGCGCGCAC CGACCCGCCA GGTCACCAAA
TTGATGGGCG TGCTGGGCGC CATCCCCGTC GGCATGCCTT TGCCGCAAAT TCCGGACGGG
CTGAGCAAAG GCACCATCGA AGGCTGCGTG ATTCCCTGGG AAGTGGTGCC TTCGGTCAAG
GTCCATGAGC TCACCAAATT CCATGCGGAA TTTGACCCGG CCGGTGGTGC CCTGTACACC
CTGACGTTTG TGATGGCGAT GAACAAGGCC AAGTACAACT CACTGCCGCC CGACCTCAAG
AAAGTCATCG ACAACAATTC GGGCATGGCC ACCTCGGCCT GGCTCGGCAA GGTGCAGCAG
GGCAACGACG CTGCCGGCCG CAAGAGCGCC AGCGACCGCG GCAACACCAT CTACACTGTG
AGTGCGGCCG AGGCGCAGGA ATTCCGCCGC AAGTCGCGTG CGGTGGAAGT CGAGTGGGTG
GAAGACATGA ACAAGAAAGG CTTTGACGGC AAGAAACTGC TGGACACGGC ACGCAGCCTC
ATTGAAAAGC ACACCAAGGC CACCAAGGCC TGA
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| Protein sequence | MIQRRTLLKS GAAVALGAPA LSGLAQQVVT LKFHTFMSPQ SNVWQSMHKP WMEKVEKESG
GRIKFEAYPA MQLGGTPVQL YDQVKDGVVD VVWTLPGNTA GRFPRVDVFD LPFMMSNAEA
TSKAYWEYVQ TVAVDEFKDT QVLALHVHGP GVIHTVNKPV KSINDMRGLK LRAPTRQVTK
LMGVLGAIPV GMPLPQIPDG LSKGTIEGCV IPWEVVPSVK VHELTKFHAE FDPAGGALYT
LTFVMAMNKA KYNSLPPDLK KVIDNNSGMA TSAWLGKVQQ GNDAAGRKSA SDRGNTIYTV
SAAEAQEFRR KSRAVEVEWV EDMNKKGFDG KKLLDTARSL IEKHTKATKA
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