Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2119 |
Symbol | |
ID | 4015230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2209895 |
End bp | 2210680 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637941789 |
Product | Asp/Glu racemase |
Protein accession | YP_548944 |
Protein GI | 91787992 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3473] Maleate cis-trans isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.296834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0170584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCG CAGCGCAAGC CGCCCCCCTG CCCGCCGCCA GCAATTACCG TGTCGGCCTG ATCGTGCCGA GCTCCAACAC CACCATGGAG ACGGAAATCC CGGCCATGCT GCGCGCCCGC GAGCAGGTGC TGCCCGAACG TTTCACGTTT CACTCCAGCC GCATGCGCAT GAAATCGGTC ACCAAGGAAG AGCTGGAAGC CATGGACCGC GACTCGGACC GCTGTGCGCT CGAGCTGTCA GACGCCCGCA TGGATGCCAT GGGCTACGCC TGCCTGGTGG CCATCATGAG CATGGGCAAG GGCTACCACC GTGAATCCCA GCGTCGTCTG CACGAAGCCA CCGTGGCCAA CGGCGCACCC ACACCGGTGA TCACCAGCGC AGGCGCGCTG GTCGAGGGCC TGCAGGCCAT GGGCGCCAAG CGCGTGGCCA TCATCGCGCC GTACATGAAA CCGCTGACCC GCCTCGTCAT TGACTACATC GAAAACGAAG GGATTGAAGT GATTGACAGC ATTTCGCTGG AAATCCACGA CAACCTCGCG GTCGGTGCGC GCGACCCGAA GGCACCGGCC GAGTTGTGGA AGCAGCTCAA CATCAAGGGC GCCGATGCCA TCGTCGCTTC GGCCTGCGTG CAGATGCCTT CGCTCGCTTC TGTGCCACTC ATCGAGGCTG CGAGCGGCCT GCCCGTGGTG TCCAGCGCCG TCTGCACGAC TTATGCCATT CTCAAGAGCC TCGGGCTGGA GCGCCGCGTG CCCGGCGCCG GCGCCTTGCT GTCGGGCCGC TACTAG
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Protein sequence | MPSAAQAAPL PAASNYRVGL IVPSSNTTME TEIPAMLRAR EQVLPERFTF HSSRMRMKSV TKEELEAMDR DSDRCALELS DARMDAMGYA CLVAIMSMGK GYHRESQRRL HEATVANGAP TPVITSAGAL VEGLQAMGAK RVAIIAPYMK PLTRLVIDYI ENEGIEVIDS ISLEIHDNLA VGARDPKAPA ELWKQLNIKG ADAIVASACV QMPSLASVPL IEAASGLPVV SSAVCTTYAI LKSLGLERRV PGAGALLSGR Y
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