Gene Bpro_2119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2119 
Symbol 
ID4015230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp2209895 
End bp2210680 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID637941789 
ProductAsp/Glu racemase 
Protein accessionYP_548944 
Protein GI91787992 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0170584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCG CAGCGCAAGC CGCCCCCCTG CCCGCCGCCA GCAATTACCG TGTCGGCCTG 
ATCGTGCCGA GCTCCAACAC CACCATGGAG ACGGAAATCC CGGCCATGCT GCGCGCCCGC
GAGCAGGTGC TGCCCGAACG TTTCACGTTT CACTCCAGCC GCATGCGCAT GAAATCGGTC
ACCAAGGAAG AGCTGGAAGC CATGGACCGC GACTCGGACC GCTGTGCGCT CGAGCTGTCA
GACGCCCGCA TGGATGCCAT GGGCTACGCC TGCCTGGTGG CCATCATGAG CATGGGCAAG
GGCTACCACC GTGAATCCCA GCGTCGTCTG CACGAAGCCA CCGTGGCCAA CGGCGCACCC
ACACCGGTGA TCACCAGCGC AGGCGCGCTG GTCGAGGGCC TGCAGGCCAT GGGCGCCAAG
CGCGTGGCCA TCATCGCGCC GTACATGAAA CCGCTGACCC GCCTCGTCAT TGACTACATC
GAAAACGAAG GGATTGAAGT GATTGACAGC ATTTCGCTGG AAATCCACGA CAACCTCGCG
GTCGGTGCGC GCGACCCGAA GGCACCGGCC GAGTTGTGGA AGCAGCTCAA CATCAAGGGC
GCCGATGCCA TCGTCGCTTC GGCCTGCGTG CAGATGCCTT CGCTCGCTTC TGTGCCACTC
ATCGAGGCTG CGAGCGGCCT GCCCGTGGTG TCCAGCGCCG TCTGCACGAC TTATGCCATT
CTCAAGAGCC TCGGGCTGGA GCGCCGCGTG CCCGGCGCCG GCGCCTTGCT GTCGGGCCGC
TACTAG
 
Protein sequence
MPSAAQAAPL PAASNYRVGL IVPSSNTTME TEIPAMLRAR EQVLPERFTF HSSRMRMKSV 
TKEELEAMDR DSDRCALELS DARMDAMGYA CLVAIMSMGK GYHRESQRRL HEATVANGAP
TPVITSAGAL VEGLQAMGAK RVAIIAPYMK PLTRLVIDYI ENEGIEVIDS ISLEIHDNLA
VGARDPKAPA ELWKQLNIKG ADAIVASACV QMPSLASVPL IEAASGLPVV SSAVCTTYAI
LKSLGLERRV PGAGALLSGR Y