Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2117 |
Symbol | |
ID | 4015228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2208134 |
End bp | 2208724 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637941787 |
Product | NUDIX hydrolase |
Protein accession | YP_548942 |
Protein GI | 91787990 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.047228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.018357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGTCA GAGGCAAAGC CGCTACACTT ATTTGTATGC ACCGCCCTCC CCTGAAACAC TGCCGCGTTT GCGGTACCGC TGTCGCTTAC CGCCTCCCCG ATGATGGTGA TACCAAGGAG CGGGCTGTCT GCCCGGCCTG CCACACCGTG CATTATGAAA ACCCGCTCAA TGTGGTGGGC ACCGTGCCCA TCTGGGGCGA AGACGGCGGG CAGGTGCTGC TGTGCAAGCG CAATATCGAA CCCCGCTGGG GCAAATGGAC GCTGCCTGCG GGCTTCATGG AACTGGGCGA AACCACTTCA GAGGGCGCCG CACGCGAGAC CGACGAGGAA GCCGGCGCGC AGTTTGAAAT GCAGGGCCTC TTCACCGTCC TGAACGTGGT GCGCGTTGGC CAAGTCCACC TGTTTTACCG CGCCCGCCTG CTAAGCACCG AGTTCAAGCC CGGCCATGAA ACCCTGGAAG CCAGGCTGTT CACCGAGTCG GAAATTCCCT GGGACGAGAT TGCCTTCAAG ACAGTCAAAG CAACGCTGGA GCATTACTTT GCAGACCGGC GGACGGGGAA ATTCGGCATT CACACCGTCG ACATCGCCTG A
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Protein sequence | MPVRGKAATL ICMHRPPLKH CRVCGTAVAY RLPDDGDTKE RAVCPACHTV HYENPLNVVG TVPIWGEDGG QVLLCKRNIE PRWGKWTLPA GFMELGETTS EGAARETDEE AGAQFEMQGL FTVLNVVRVG QVHLFYRARL LSTEFKPGHE TLEARLFTES EIPWDEIAFK TVKATLEHYF ADRRTGKFGI HTVDIA
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