| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2113 |
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| Symbol | |
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| ID | 4015224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2203070 |
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| End bp | 2204653 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637941783 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_548938 |
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| Protein GI | 91787986 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.142361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0512396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA AGCCAAACCT GCTCTCGGTC GCCGTGTTTT GTGCGGTAGC TGCTACAAGT
TTTGCAGCGT CAGCGCAGAC CCTGCGCGTC GCCAACCAGG GTGACGCGCT GTCCATGGAC
CCGCATTCGC TCAACGAATC GATGCAGCTC AGTGTGACGG GCAATGTTTA CGAAGGCCTG
GTGATTCGCA ACAAGGACCT GAGCCTGGCC CCGGGCCTGG CGACCGCCTG GAAGCAGACC
TCGCCGACCG TGTGGCGTTT TGAGCTGCGC AAGGGCGTGC AGTTTCATGA CGGCACGCCT
TTCACGGCCG ATGACGTGGT GTTCAGCTTC CAGCGCACGC AGGTCGAAGG CTCCGACATG
AAGAGCTACA CCAACGACTT CAAGGAAGTG CGTAAGGTCA ACGACCACGT GGTCGAAATC
GAAACCAAGA CGCCTTTTCC CATCCTTCCT GATGTGATCT CGCTGGTCTA CATGATGAGC
AAGAAGTGGT GCGAGACCAA TCAGGCAGCC AAGCCGGTGG ACCGTCGCAA GGGTGTCGAG
AACGCCGCCT CGTTCCGCGC CAACGGCACG GGCCCGTTCC GTGTGCGCGA GCGCCAGCCC
AATGTGCGAA CCACCTTTGT CCGCAACGGC AACTACTGGG GCAAGATCGA GGGCAACGTT
CAGGAGGTGG TCTTCACCCC GATCGGCAAT GACGCGACCC GCGTGGCTGC CCTGCTGTCG
GGCGAGATCG ACGTCATGGA GCCGGTGCCG GTTCAGGATA TCGACCGCGT CAACAGTGCC
CCTGCCACCC GCGTGCTGGC CGGCCCCGAG TTGCGCACCA TCTTTTTGGG CATGGACCAG
AAGCGCGACG AGCTGCTGTA TTCCAGCGTC AAGGGCAAGA ATCCGTTCAA GGACAAGCGC
GTGCGCCAGG CCTTCTACCA GGCCATCGAT ATCGAGGGCA TCAAGAAGAC TGTGATGCGT
GGCGGCTCGA ACACGACCGC GCTGCTGGTG GGCCCCGGCA TCAATGGCTT CCAGGCCGAT
CAGAACAAGC GACTGCCGTA TGACCCGGAA GCAGCCAAGA AGCTGATGGC GGAGGCCGGT
TACCCGAACG GCTTCGAGGT CTCCATGAAC TGCCCGAACG ACCGCTATGT GAATGACAGC
CGGATTTGCC AGACCGTGGC CGCCAACCTG TCGCGCATCA ACGTTAAGAT CAACCTGCAG
GCTGAGACCA AGGGCAGCTA CTTCCCTAAG GTGCTGCGCC GCGACACCAG CTTCTACATG
CTGGGCTGGA CGCCCAGCAC CTACGACGCG CACAACGCGC TCAACGCGCT GCTCGCCTGC
GTCGACGACA AAGGTGCCGG CCAATTCAAC CTGGGGGCTT ATTGCAATCC CAAGGTCGAC
GAGCTCACCA AGAAGGTGCA GGCCGAGACC GACAAGGCCA AGCGCAACGC CATGATCAAG
GAAGCGTTCG AGATCCATTC GGCCGACATC GGCCACCTGC CGCTGCACCA GCAGGCGCTG
GCCTGGGGCA TGAGCAAGAA GGTCGAGTTG GTCCAGCTGG CCGACAACTT CATGTTCTAC
AAGTGGGTGA GCGTCAAAAA ATAA
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| Protein sequence | MKFKPNLLSV AVFCAVAATS FAASAQTLRV ANQGDALSMD PHSLNESMQL SVTGNVYEGL
VIRNKDLSLA PGLATAWKQT SPTVWRFELR KGVQFHDGTP FTADDVVFSF QRTQVEGSDM
KSYTNDFKEV RKVNDHVVEI ETKTPFPILP DVISLVYMMS KKWCETNQAA KPVDRRKGVE
NAASFRANGT GPFRVRERQP NVRTTFVRNG NYWGKIEGNV QEVVFTPIGN DATRVAALLS
GEIDVMEPVP VQDIDRVNSA PATRVLAGPE LRTIFLGMDQ KRDELLYSSV KGKNPFKDKR
VRQAFYQAID IEGIKKTVMR GGSNTTALLV GPGINGFQAD QNKRLPYDPE AAKKLMAEAG
YPNGFEVSMN CPNDRYVNDS RICQTVAANL SRINVKINLQ AETKGSYFPK VLRRDTSFYM
LGWTPSTYDA HNALNALLAC VDDKGAGQFN LGAYCNPKVD ELTKKVQAET DKAKRNAMIK
EAFEIHSADI GHLPLHQQAL AWGMSKKVEL VQLADNFMFY KWVSVKK
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