| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2096 |
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| Symbol | |
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| ID | 4015244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2184353 |
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| End bp | 2185468 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637941765 |
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| Product | spermidine/putrescine ABC transporter ATP-binding subunit |
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| Protein accession | YP_548921 |
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| Protein GI | 91787969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0587102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.279857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTAC CCGCGTCACC TGGCGATGGC TACCTACGGA CTGACCAGTT GGTCAAGCGC
TTTGACGGCG TGGTGGCCGT GGACGACGTC TCGCTGTTCA TTCAAAAAGG CGAAATTTTT
GCGCTGCTCG GTAGCTCCGG CTGCGGAAAA TCAACGCTGC TGCGCATGCT GGCCGGCTTT
GAGAAACCGA CCTCCGGTTC GGTCATCCTG GATGGGGTGG ACATCGCCTC GTTTCCGCCC
TACGAGCGGC CCATCAACAT GATGTTCCAG TCGTACGCGC TGTTTCCTCA CCTCAACATC
TGGGACAACA TTGCCTTTGG CCTGAAGCGA GAGGGAATGC CCAAGGCAGA GATCGAAGCA
CGTGTGCAGG AGATGCTCAA GCTGGTGCAA CTGGAAGCTT TTGCCAAACG CAAGCCGCAC
CAGCTCTCGG GCGGCCAGCA GCAGCGCGTG GCCCTGGCGC GCAGCCTGGC CAAGAAACCG
CAACTGCTGC TCCTGGACGA GCCGCTGGGC GCGCTCGACA AGAAGCTGCG GGAGCGCACG
CAATTTGAAC TCGTCAACAT CCTGGAGTCG GTGGGCGTCA CCTGCGTCAT GGTGACCCAT
GACCAGGAGG AAGCCATGGC CATGGCTTCC CGTATTGCCG TCATGAGCCA CGGCCGGGTG
CTGCAGGTGG GTACGCCGAA GGAGATCTAC GAGCACCCGA ACTGCCGTTT TGTGGCCGAC
TTCATTGGCA ACGTCAATTT GATGGAGGGT GAACTCACGG CGGATGAAGC GGACCATTGC
GAGGTAACGA CCGGGTACGG CGTGGTGAAC GTGGGACATG GCATCAGCGG TACCCAGGGC
ATGTTGGTTG CCGTTGCCGT GCGTCCCGAG AAAATCCACA TCTCCAAAAC CCGGCCTGAC
GTCACCGTCA ACCTGTTCAG CGGCAAGGTG CGCGAAATCG CCTATTTCGG CAGCTACAAC
ACGTTTATTG TGGACATGAA GGGGGAGGGC GGCCAAAGCC GCACCATCAA GATCACGGAA
ACCAACACCA CGCGGCATGA AGGCAGCGTG ATCACCTGGG ATGACCCGGT CTTTTTCTGG
TGGGATGACT CGGCACCGGT GGTGCTGACC CAATAA
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| Protein sequence | MNLPASPGDG YLRTDQLVKR FDGVVAVDDV SLFIQKGEIF ALLGSSGCGK STLLRMLAGF
EKPTSGSVIL DGVDIASFPP YERPINMMFQ SYALFPHLNI WDNIAFGLKR EGMPKAEIEA
RVQEMLKLVQ LEAFAKRKPH QLSGGQQQRV ALARSLAKKP QLLLLDEPLG ALDKKLRERT
QFELVNILES VGVTCVMVTH DQEEAMAMAS RIAVMSHGRV LQVGTPKEIY EHPNCRFVAD
FIGNVNLMEG ELTADEADHC EVTTGYGVVN VGHGISGTQG MLVAVAVRPE KIHISKTRPD
VTVNLFSGKV REIAYFGSYN TFIVDMKGEG GQSRTIKITE TNTTRHEGSV ITWDDPVFFW
WDDSAPVVLT Q
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