| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2082 |
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| Symbol | |
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| ID | 4015269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2166140 |
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| End bp | 2167840 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637941751 |
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| Product | anti-sigma-factor antagonist domain-containing protein |
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| Protein accession | YP_548907 |
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| Protein GI | 91787955 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.806146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCG ACCCCGCCCC GCTCGCGCTG GTGGTGGACG ACCAGCCGGT GACCCGCCTC
ATGGTGAAGC GGGCGCTGGA GCGCTTCGGC TGCGCTCCGG TACTGGAGGC CGCCGACGGG
ATCGCGGCGC AGGCGATCCT GCGTGAGCAC CCGGATGTCG CGCTGGTTCT GACGGACATC
ATGATGCCCA GGATGGACGG GCTGGAGCTG CTGCACTGGG GGCGCGAGAC GGTGCCGGGT
GCCATCTGGA TCGTCCTCTC CGGGCTGGAC ACCTTCGACT CGGCGGTGGC GGCGATCCGG
TTCGGGGCGT TCGACTTCCT GCCGAAGCCG CCGCGGCTGG AAGAGATGGA GGTCTCGGTG
CGCAACGCGC TGGAGCGGCG GCGGCTGCTG GCGGAGCAGG CGCGGCTGCA CGCGGAGCTG
CAGCGAAAGG TGCGGGAGCT GGAGGAGAAG TCGGAGCTGC TGCGGCGCGA CCTGGAGCGG
GCGGAGGTGA TCCAGCGCGC GCTTCTGCCG GGCAGCCCGC CGCCGGTGGA GAGCTACTGC
GTCCAGGCGG TCTACCGGCC GGGACAGCAC GTGGGCGGTG ACCTCTACGA CGTGGTCCGG
CTCGGCGAGC GGCACCTGGC CTTCTACCTG GCGGACGCCA CCGGTCACGG CGTCACCTCG
GCGATGCTCT CGGTGCTGTT CAAGCAGCGG CTGGTGCTGG TGGACCCGGA GACGGGCCGC
GCGCTGGCAC CGGCGGCGGT GCTGGACGCG GTGAACCGCT CGCTCTGCCA GTCGATCGAA
GCGCCGGGTC TCTTTGTGAC CGCCGTCATT GGCCTGCTCG ACACGGTGGA GGGTAGCGTG
ACGCTGGCAT CCGCGGGGCA CCCGCCCGTG CTGCACGTGC GCGAGGGCCG GGAGACGCGC
CTGATCCGGC GCACGGGGCC GGCGCTGGGG CTGGCGCTGG ATGCACGCTT CCACGAGGAG
CGGCTCTGGC TGGCGCCGGG CGATCGAATG CTCCTCTACA CCGATGGGCT CCTCCCGTCG
GGGACGGAGC GGGAGCTGGA ACGGCTCAAG CGGGTACTCT CCATGCCGCT CTCCAGCGCG
CAGGAGATGT TGGGGGAGTT GCGCGGTGGC GCCGCCACGG ACCCGGACCC GGACGACGTG
ACCCTCCTCC TGATCGACGC GCACGCCGGC CCCTCCTCGT TCGACAACGG CGCCGCGAGC
CCCAACCTGA CCGCCTCGGG CGCGGCGCAG CCGGGCGGCG AGGTCGTCTT CTACGGAGAG
ACGGAGGACG CCGTGCACCT CGCGCTGCGC GGCCGGGCCA CCTGGATGCA CTGCGACGCC
TTCTACGAGA CCGCGCGTGC CGTACTGGAG GAGGGGCGGC CGCTGGTGCT GGACCTCTCC
GGCTGCGACT ACCTGGACAG CACCTGCCTC GGCACGGTGC ACGAGCTGGT CGGCCGGGGC
CGCGTGGTGC TTGCGGGGGT GACGCCTGTG GTGCGCGCGC TCTTCGAGGA GCTGAGCATG
GATCGGGTGC TGGCCAGCAT CCGCGAGGAC GTTACCGCCG CGCCCGAGCT CTACGCGCTG
AGCACCCGGC ACGACGACCC GGCGGCGTGG CGTCAGCGGA TACTGCACGC GCACGAGGCG
CTCTCAGGGC TGAGCGAGCA CAACCGCGAG GAGTTCCGGG GGGTGGTCGA GTCGCTGCGC
GGGGAGATAG ACGGCGGATG A
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| Protein sequence | MTPDPAPLAL VVDDQPVTRL MVKRALERFG CAPVLEAADG IAAQAILREH PDVALVLTDI
MMPRMDGLEL LHWGRETVPG AIWIVLSGLD TFDSAVAAIR FGAFDFLPKP PRLEEMEVSV
RNALERRRLL AEQARLHAEL QRKVRELEEK SELLRRDLER AEVIQRALLP GSPPPVESYC
VQAVYRPGQH VGGDLYDVVR LGERHLAFYL ADATGHGVTS AMLSVLFKQR LVLVDPETGR
ALAPAAVLDA VNRSLCQSIE APGLFVTAVI GLLDTVEGSV TLASAGHPPV LHVREGRETR
LIRRTGPALG LALDARFHEE RLWLAPGDRM LLYTDGLLPS GTERELERLK RVLSMPLSSA
QEMLGELRGG AATDPDPDDV TLLLIDAHAG PSSFDNGAAS PNLTASGAAQ PGGEVVFYGE
TEDAVHLALR GRATWMHCDA FYETARAVLE EGRPLVLDLS GCDYLDSTCL GTVHELVGRG
RVVLAGVTPV VRALFEELSM DRVLASIRED VTAAPELYAL STRHDDPAAW RQRILHAHEA
LSGLSEHNRE EFRGVVESLR GEIDGG
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