Gene Bpro_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2054 
Symbol 
ID4015280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand- 
Start bp2135566 
End bp2136246 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID637941726 
ProductNUDIX hydrolase 
Protein accessionYP_548882 
Protein GI91787930 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.762923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0850915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGACA CGAGCCGCAA CATGCAGCAG GACCAGCATC TCAGAGCACG CATCGAGGAG 
ATGCTGCGCG CCTTCACGCT GCAGGCAGCC GAGCGCGACC AGCAGCATGC GGCGGCGGTG 
GCCGTGGTCA TTACCGATGA AGGCCATGGC GCCGAACTGC CCGGTTTCCC GCGGCACGCG 
GCGTGGAGCA CCCAGGCGGC CCTGCTGCTG ACGCGGCGCG CCGGCCACCT GCGCAAGCAT 
GCGGGGCAGT GGGCCCTGCC CGGGGGACGC ATCGACGCAG GAGAAACGGC GGAGCAAGCC 
GCGCTGCGCG AGTTGGCCGA GGAGGTGCAC CTGGAACTCG ATGTCAGCGC CATCCTGGGC 
CGGCTCGATG ATTTTGTGAC CCGCTCGGGT TTTGTGATCA CGCCGGTGGT TGTGTGGGCC 
GGCGCGGCGC AGCACATCCG GCCCAATCCG GCCGAGGTGG CCAGCATTCA CCGCATCCCC 
ATCGCCGAGT TTCTGCGCGC AGACGCGCCC ATGCTGGCCG ATGAAGGGCA CGGCGGGCAC 
CCGGTGCTGC GCATGCCGGT CGGCAACCAC TGGATTGCCG CGCCGACGGC AGCGATCCTC 
TACCAGTTTC GGGAGGTCTG CATCGAGGGC CGGCCCACCC GCGTGGCGCA TTTCGAGCAG 
CCGGCGTTTG CCTGGAAATA G
 
Protein sequence
MTDTSRNMQQ DQHLRARIEE MLRAFTLQAA ERDQQHAAAV AVVITDEGHG AELPGFPRHA 
AWSTQAALLL TRRAGHLRKH AGQWALPGGR IDAGETAEQA ALRELAEEVH LELDVSAILG 
RLDDFVTRSG FVITPVVVWA GAAQHIRPNP AEVASIHRIP IAEFLRADAP MLADEGHGGH 
PVLRMPVGNH WIAAPTAAIL YQFREVCIEG RPTRVAHFEQ PAFAWK