| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2052 |
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| Symbol | |
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| ID | 4015278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2132690 |
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| End bp | 2134384 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941724 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_548880 |
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| Protein GI | 91787928 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0538673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA AGACCATTCA GCTCAACCCC CGCAGCAAAA ACATCACCGA AGGCAAATCG
CGCGCGCCCA ACCGCTCGAT GTACTACGCC ATGGGCTATG AAGAGGCCGA CTTCAAGAAG
CCCATGATTG GTGTGGCCAA CGGGCACAGC ACCATCACCC CCTGCAACAG CGGCCTGCAA
AAGCTGGCGG ACGCGGCCAT TGCCGGCATT GAAGAAGCCG GCGGCAACGC CCAGGTGTTC
GGCACGCCCA CCATCTCGGA CGGCATGGCC ATGGGCACCG AGGGCATGAA GTACTCGCTG
GTCAGCCGCG AAGTGATCTC CGACTGCATC GAAACCTGCG TGCAGGGCCA GTGGATGGAC
GGCGTGCTGG TGATCGGCGG CTGCGACAAG AACATGCCCG GCGGCCTGAT GGGCATGCTG
CGCGCCAACG TGCCGGCCAT CTACGTCTAT GGCGGTACCA TTTTGCCGGG CAGCTACAAG
GGCAAAGACC TCAACATCGT CAGCGTGTTT GAAGCCGTCG GCGAAAACGC AGCAGGCCGC
ATGAGCGATG AAGACCTGCT GCAAATCGAG CGCCGCGCCA TTCCCGGCAC CGGTAGCTGC
GGCGGCATGT ACACGGCCAA CACCATGTCC AGCGCCTTCG AGGCGCTCGG CATTTCGCTG
CCCTACTCCA GCACCATGGC CAATCCGCAC GACGAGAAAA TGAACTCGGC CAGGGAGTCC
GCCAAGGTCC TGGTCGAAGC CATCAAGAAA GACATCAAGC CGCGCGATCT CGTCACGAAG
AAAGCCATTG AAAACGCCGT GGCAGTGATC ATGGCCACGG GCGGCTCCAC CAATGCCGTG
CTGCACTTCC TGGCGATTGC GCATGCCGCC GGCGTGGACT GGACAATCGA CGACTTCGAA
CGCGTGCGCC AAAGAACGCC GGTGCTGTGC GACCTGAAGC CGTCCGGCAA GTACCTGGCC
GTGGACCTGC ACCGCGCCGG CGGCATTCCG CAGGTCATGA AGATGCTGCT GGCGGCCGGC
CTGCTGCATG GCGACTGCCT GACGATCACC GGCCAAACCA TTGCCGAGGT GCTGAAGGAT
GTGCCCGAAG CGCCGCGCGC CGACCAGGAC GTGATTCGCC CCATCAGCAA CCCCATGTAC
GCCCAGGGCC ACCTGGCCAT CCTGAAGGGC AACCTCTCGC CTGAAGGCTG CGTGGCCAAA
ATCACCGGCC TGAAAAACCC GGTCATGACG GGCCCGGCCC GCGTATTTGA CGACGAGCAG
TCGGCGCTGG CCGCCATCCT GGCCGGCAAG ATCAAGGCGG GCGACGTGAT GGTGCTGCGT
TACCTCGGCC CCAAGGGCGG TCCCGGCATG CCTGAAATGC TGGCGCCTAC CGGTGCGCTG
ATTGGCGCCG GCCTGGGCGA AAGCGTGGGC CTGATCACCG ACGGCCGCTT CTCCGGCGGC
ACCTGGGGCA TGGTAGTCGG CCATGTGGCC CCCGAAGCGG CCGCCGGCGG CAATATCGCA
TTCATCAACG AAGGCGACTC CATCACCATT GACTCAAAAC AGTTGCTGCT GCAACTGAAC
ATCAGCGACG CGGAGCTGGA AAAACGCAAG GTCGGCTGGA AAGCACCGGC ACCGCGCTAC
AACCGCGGCG TGCAGGCCAA GTTTGCCTTC AACGCGTCGA GTGCCAGCAA GGGTGCGGTG
CTGGACGACT ATTGA
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| Protein sequence | METKTIQLNP RSKNITEGKS RAPNRSMYYA MGYEEADFKK PMIGVANGHS TITPCNSGLQ
KLADAAIAGI EEAGGNAQVF GTPTISDGMA MGTEGMKYSL VSREVISDCI ETCVQGQWMD
GVLVIGGCDK NMPGGLMGML RANVPAIYVY GGTILPGSYK GKDLNIVSVF EAVGENAAGR
MSDEDLLQIE RRAIPGTGSC GGMYTANTMS SAFEALGISL PYSSTMANPH DEKMNSARES
AKVLVEAIKK DIKPRDLVTK KAIENAVAVI MATGGSTNAV LHFLAIAHAA GVDWTIDDFE
RVRQRTPVLC DLKPSGKYLA VDLHRAGGIP QVMKMLLAAG LLHGDCLTIT GQTIAEVLKD
VPEAPRADQD VIRPISNPMY AQGHLAILKG NLSPEGCVAK ITGLKNPVMT GPARVFDDEQ
SALAAILAGK IKAGDVMVLR YLGPKGGPGM PEMLAPTGAL IGAGLGESVG LITDGRFSGG
TWGMVVGHVA PEAAAGGNIA FINEGDSITI DSKQLLLQLN ISDAELEKRK VGWKAPAPRY
NRGVQAKFAF NASSASKGAV LDDY
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