| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2040 |
|---|
| Symbol | |
|---|
| ID | 4015304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2118974 |
|---|
| End bp | 2119972 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637941712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_548868 |
|---|
| Protein GI | 91787916 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0456371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACCA AGCTGAAATT CACCGCTGCC TCACTCTGCT GGGCCCTGTT CGCCGTGCAC
GGCGGCGCTT CCGCACAACA GCCGATGTCC CAGGTCGGTG GTTTCCCGAA CCAGACGATC
AGATTTGTGT CGCCCTTTCC CGCCGGTGGC GGCAATGACG CCACGACCCG TTTCGTGACG
AGCCGGCTGT CCGAGATCAC CGGCCAAAGC GCGGTCGTCG ACAACCGGGG CGGCGCCGGC
GGCAACATCG GCGCCAAGAC CGTGGCCGAT GCCAGGCCCG ACGGCTATAC CGTGCTGACG
GGCCAGGTCT CGCTGATGGC AGTCAACCCC ACGCTGTATG CGTCGCCGGG CTTTGACCCG
CTGAAAAATT TCATGCCCAT CACCCAGATC AATGCGGCAC CCCTGGTCCT GGTCGTGGCC
AGCAACTCAC CCTACAAAAC CATTGCCGAC CTGGCCACCC AGATCAAGAG CCAGCCTGGC
CGCGTCACCT ATGCCACGCC CGGCAACGGC ACGCTCTCGC ACCTGGTCGG TGTGGTGCTT
GAAAAGGACA GCGCCCTGAG CATGACCCAT GTGCCGTACA AGGGCGCCGC CCCGGCGATC
ACCGACCTGC TCGGCGGTCA GGTCGATTTG CTCATCACCT CGACGGCATC CGTGTCCAGC
TTCATCCAGA ACGGCAAGAT GCGCGCCCTC GCCGTGACCA GCCCGCGCCG CATTGGCGTG
TTTGCAAAGG TCCCGACGCT GGAAGAGCTC GGCTACCGCA ATACGACCTT TGAAGACTGG
TATGGCTTTT TTGCGCCGGC CGGCACGCCG CCGGAACGCG TGGCCTATCT GCACGACAGC
ATTGTGCGGG CGCTCAAATT GCCGGAAGTC AACAAACTGA TCACCGACGG CGGCAGCGAA
GTGGTCGGCA ACACGCCGGC GGCCTTTGCT GCGCAGCTCA AGGAAGACAT CGCCCGCTGG
TCGCGCGTCG TCAAGCTGTC GGGTGCGAAA CTGGACTGA
|
|---|
| Protein sequence | MLTKLKFTAA SLCWALFAVH GGASAQQPMS QVGGFPNQTI RFVSPFPAGG GNDATTRFVT
SRLSEITGQS AVVDNRGGAG GNIGAKTVAD ARPDGYTVLT GQVSLMAVNP TLYASPGFDP
LKNFMPITQI NAAPLVLVVA SNSPYKTIAD LATQIKSQPG RVTYATPGNG TLSHLVGVVL
EKDSALSMTH VPYKGAAPAI TDLLGGQVDL LITSTASVSS FIQNGKMRAL AVTSPRRIGV
FAKVPTLEEL GYRNTTFEDW YGFFAPAGTP PERVAYLHDS IVRALKLPEV NKLITDGGSE
VVGNTPAAFA AQLKEDIARW SRVVKLSGAK LD
|
|---|
| |