| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2039 |
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| Symbol | |
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| ID | 4015303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2117729 |
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| End bp | 2118967 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637941711 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_548867 |
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| Protein GI | 91787915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.482108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0466473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAG GTCACCCAGG CGCTCCCCGC ATGAATAAAA CATCGCCGCC GGCTACCTCA
CCATCCGGTG CGTCGCCCCT GACCCGTCTG GTCCACGCCG GCAAGCAGCC CGCCTTCGAC
GGCGGCCGGC CGGTCAACCC GCCCGTGGTG CGCGCCAGCA CCGTGCTGTT TGACAACACG
GCGCAGCAGC GCGAGATGCG CATGCGGCGC GGCGATGAGC GGCTGTTCAC CTACGGAGCC
CGTGGCAACC CGACCAATTT CGCACTCGAA GATGTGGTCA GTGAACTCGA AGGCGCCTAC
CGGACGCGGC TCTTTCCCAC CGGCCTGGCC GCCATCGCCA TGACGCTGCT CTCTTACCTG
AAGCCCGGCG ACCACCTGCT GATGTCAGAC AGCGTGTACG AGCCGGCGCG CAAGCTGGTG
GGCTCCTTCC TCACGCCGTA CAACATCCGC TGCACTTTCT TTGCGGCCGA TGGCAGCGAC
GTGGAAGAAA AAATCGAAGC CGGCACGTGC ATGATTTATG CCGAATGCCC GGGCTCGCTG
GTCTACGAAA TGTGCGACCT GCCGCGTCTG GCCGAAATCG CGCGCGTGAG AGGGCTCCTG
CTGGTGGCCG ACAACACCTG GGGCTCCGGC TGCCAATACC GGCCGCTGGC TTTGGGCGCC
GATGTATCCA TCATGGCTGC CACCAAATAC CTTTCGGGCC ATTCCGACGT GATGATGGGC
ACCGTTGCCA CCACGAAAGA TACCTGGCAG GCACTGGCCG AACGCAGTGA CGCCTTCGGC
ATGACGGTCA GCCCCGACGA TGCCTACCTG GTGCTGCGCG GCACACGCAG CCTGGCCGCG
CGCCTGGCCC TGCACGAGAG TCATGGCTTG CAAGTGGCGT ACTGGCTGCA ATCACGCAGC
GAAGTAGCCA CGGTCTTCTG CCCCGCCTTG CCCGATCACC CGGGTCATGC CCTGTGGCAA
AGAGACTGCA AGGGAAGCAA TGGCCTGGTT TCTTTCGAAC TCCAACCCGG CTTCGACCAG
AGAGCCGCCG AGCGGCTGAT CGACAGCCTT CAATTGTTTG GCATTGGTGC CTCGTGGGGC
GGCTATGAAA GCCTGGTCAC GCTGGCCGAC ATGCGCCGCG CCCGCAGCGT GACCGACTGG
TCGGACCGTG GCCAGGTGAT CCGGCTGCAC ATCGGGCTGG AAGACCCGGC CGACCTGCTG
CGCGATTTGC TGCAGGGATT TGCCGCACTC ACCGCCTGA
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| Protein sequence | MHQGHPGAPR MNKTSPPATS PSGASPLTRL VHAGKQPAFD GGRPVNPPVV RASTVLFDNT
AQQREMRMRR GDERLFTYGA RGNPTNFALE DVVSELEGAY RTRLFPTGLA AIAMTLLSYL
KPGDHLLMSD SVYEPARKLV GSFLTPYNIR CTFFAADGSD VEEKIEAGTC MIYAECPGSL
VYEMCDLPRL AEIARVRGLL LVADNTWGSG CQYRPLALGA DVSIMAATKY LSGHSDVMMG
TVATTKDTWQ ALAERSDAFG MTVSPDDAYL VLRGTRSLAA RLALHESHGL QVAYWLQSRS
EVATVFCPAL PDHPGHALWQ RDCKGSNGLV SFELQPGFDQ RAAERLIDSL QLFGIGASWG
GYESLVTLAD MRRARSVTDW SDRGQVIRLH IGLEDPADLL RDLLQGFAAL TA
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