Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2037 |
Symbol | |
ID | 4015301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2115138 |
End bp | 2116607 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637941709 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_548865 |
Protein GI | 91787913 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.248346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0238408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAT CCAGGCTCCC CCAACTCCTG ACGGCGAGCG CCGCGGCGCT GCTGGCGGGT TGTTCGATGA TTCCCAAATA CGAGCGGCCG GCCGCGCCGA TTGCCGCAGA GTGGCCGGCC TCCAGCTGGA TGGCTGAATC GGCCCAGGCG ACCGCCGGTG CCAGTCCCGC CGCGGCAACG GCACCCGCCG TGCCGGCGGC CGACATTGAA TGGCAGAGTT TTTTCAGTGA TCCCAAGCTC AGGCTACTGA TAGAGGCGGC GCTGCGCAAC AATCGCGACC TGCGGATTGC GGTACTCAAT ATCGAGCAGG CCCGGGCCCA GTTCCAGATC CGGCGCGCCG ACCAGTTTCC GACCGTCAAT GCCGGGCTCA CGGGCTCGCG CCAGCCCAAC GCCGATGGCA ACAGCATCAC CAGCACCTAC TCCGCCGGCT TGCTGGTGAC GTCGTATGAG CTCGATTTCT TCGGCCGCGT CGCCAGCCTG AAGGAAACCG CGCTGGCGCA ATACCTGGCG ACTGAAGAGG GCCGCAAGAC CACCCAGATC AGCCTGATCG CGGCCGTGGC CAACACCTAC CTCAGCCTGC TGGCCGATGA AGAGCTGCTG GCCATCACGC AGCAAACGCT GGCGACGCGT GAAGAATCCT TCAAGCTGAG CAAGCTGCGC TTTGACAATG GCGTGACGTC CGAGCTGGAT TTCCGGCAGG CCGAGTCGCT GACGGAAGCG GCCCGTGTCT CCCTGGCCCA GCTGGTCCGC CAGCGTGCTC TGGACCAGAA TGCCCTGACG CTTTTGCTGG GCCAGCCCCT CACGGGCGAA CTGGCGGTGG CGCTGCCGGC CGGCAAGGGG CTGGCTGATA CGCCCATGAT GGTCGATGTG CCTGCCGGAC TGCCCTCCGA CCTGCTGACC CGCCGCCCCG ACATTCGCCA GGCCGAGCAG CAGCTGCTTG CCGCCAATGC GGATATCGGC GCAGCCCGCG CCGCGTTTTT CCCGCGCATT TCGCTCACGG CAAGCGCCGG CAGCGCCAGC TCGCACCTCT CGGGCCTCTT CAAGAGCGGC TCCTACGGCT GGACGCTGGC GCCCCAGTTG CTCCTGCCGA TTTTTGATGC GGGGCGCAAC CGGGCCGGGC TCGACTCTGC CAACGCCGGC CGCGACATCG CCGTGGCCCA GTACGAGAAA TCGATCCAGA CGGCCTTCCG CGAAGTTTCC GATGCGCTGG CAGGCCGCGC CACGCTGGGC GAGCAGTTGC GCGCGCAGCA GGCGCAGGCC AACGCCGAAG CCACGCGTTT CAAGCTGTCG GACCTGCGCT ACCAGAACGG TATTGCCAGC TACCTCGATT TGCTCGATGC GCAGCGTTCG CTGTTCACCG CGCGGCAAGC CGTGGTGCAA ACCCGTCTGG CCCAGCTGCA AAGCCAGGTC ACGCTGTACA AAACGCTGGG TGGTGGCTGG AAGGAGCCCG CGGCCTCCGC CACGCCCTGA
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Protein sequence | MRKSRLPQLL TASAAALLAG CSMIPKYERP AAPIAAEWPA SSWMAESAQA TAGASPAAAT APAVPAADIE WQSFFSDPKL RLLIEAALRN NRDLRIAVLN IEQARAQFQI RRADQFPTVN AGLTGSRQPN ADGNSITSTY SAGLLVTSYE LDFFGRVASL KETALAQYLA TEEGRKTTQI SLIAAVANTY LSLLADEELL AITQQTLATR EESFKLSKLR FDNGVTSELD FRQAESLTEA ARVSLAQLVR QRALDQNALT LLLGQPLTGE LAVALPAGKG LADTPMMVDV PAGLPSDLLT RRPDIRQAEQ QLLAANADIG AARAAFFPRI SLTASAGSAS SHLSGLFKSG SYGWTLAPQL LLPIFDAGRN RAGLDSANAG RDIAVAQYEK SIQTAFREVS DALAGRATLG EQLRAQQAQA NAEATRFKLS DLRYQNGIAS YLDLLDAQRS LFTARQAVVQ TRLAQLQSQV TLYKTLGGGW KEPAASATP
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