| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2036 |
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| Symbol | |
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| ID | 4015300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2111966 |
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| End bp | 2115145 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941708 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_548864 |
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| Protein GI | 91787912 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.602316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00575958 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAAAT TTTTTATTGA TCGGCCGATC TTTGCCTGGG TGATTGCCTT GTTCATCCTG
GTGGTCGGCG GTGTGTCGAT CACGCAGCTG CCGATTGCCC AGTACCCACC CGTGGCACCG
CCCGCGATCG TCATCAATAC GGCATACCCC GGCGCGTCGG CCCAGACGCT CGAGGACAGC
GTGCTGTCGG TGATTGAGCG TGAAATGAAC GGCTCGCCCG GCCTGATCTA CATGGAGTCG
GTCGCGCAGG CCGACGGTTC CGGCAGCATC ACGCTGAGCT TCCAGCCCGG CACCAATGCC
GAGCTGGCGC AGGTGGACGT GCAGAACCGC CTGTCGCGCG CCTCGCCGCG GCTGCCCGCT
GCTGTGGCGC AGCAGGGCGT ACGCGTAGAC AAGTCGCGTG CCAACTTCCT GCTGTTCACC
ATGTTGTCGT CCGACAACCC GGCGCACGAC CCGGTCGCGC TCGGCGACTA TGCCTCGCGC
AACATCGTGC CCGAACTCCA GCGCCTGCCC GGCATTGGCC AGGCCCAGCT GTTCGGCAGC
GAGCGCGCCA TGCGCATCTG GCTCGACCCG GCCAAGCTGA CCGGCTTCAG CCTTTCGGCG
AACGATGTCA ATACAGCGAT TCGTGCGCAA AATGCCCAAG TAGCCGCCGG CAGCATCGGC
GACCGGCCTA ACGTGGCAGG CCAGGGCATT GCGGCCACCG TGGTGGTCAA TGGGCAGCTC
GCCAACGTCG GGCAGTTTGG CAATATCGTG CTGCGCGCCA ACCCCGATGG CTCGTCGGTG
CGCCTGAAGG ATGTGGCGCG CATCGAATTG GGTGGCCAGA CCTACGCGAC GTCGGCGCGC
CTGAACGGCA AGCCGGCCGT GGGTATCGGC GTGCAACTCG CGCCGAACGG CAATGCACTT
GCCTCCGCCA AGGCTGTGCG AGAGAAGATG GCCGAACTTC AGCGCTACTT CCCGCAGGGC
ATGAAATGGG ACATCCCCTA CGACAGCTCG CGCTTCGTCA GGATATCGAT TTCGCAGGTG
GCCGAGACGC TGTTCGAGGC GGTGGCGCTG GTGTTCCTGG TGATGTTCCT GTTCCTGCAG
AACTGGCGCT ACACCATCAT CCCGACCATC GTGGTGCCGA TCTCGCTGCT TGGCACTTTC
GCCACGCTGC TGGCGCTCGG ATTTTCAATC AACGTGCTCA CCATGTTCGG CATGGTGCTG
GTGATTGGTA TCGTGGTGGA CGATGCGATC GTGGTGGTCG AGAACGTCGA GCGCATCATG
ACCGAAGAGG GGCTGCCGCC GCTCGAGGCC ACGCGCAAGG CGATGAAGCA GATCTCCGGC
GCCATCATCG GCGTGACCGT GGTGCTGATC TCCGTGTTCG TGCCGCTGGC GTTCTTCGCG
GGCTCGACCG GCAATATCTA TCGCCAGTTC TCGGCGGTGA TGGTGTCGTC GATCGGCTTC
TCGGCATTCA TGGCGCTGTC GCTCACGCCG GCGCTCTGCG CCACGCTGCT CAAACCGGTA
GAGGCCGGAC ACCACCACGA AAAGACCGGT TTCTTCGGTT GGTTCAATCG GGGCTTCACA
CGCACGGCCA AGGGTTATGA AAGCGTGGTT GCGCGCATCC TCAAGCGTGC AGCGCGCTAT
CTGGTGATCT ACGCAGCGAT CATCGGCGCG ATCGCCGTGG TCTTCCTGCG CCTGCCAACT
TCATTTTTAC CCAACGAAGA CCAGGGCACT CTCCTGGTGA ACGTGCAGTT GCCCCCGGGT
GCGACATATG AGCGCACGCT CTCGGTGATG CAGAACGTCG AGGAGTTCAT CCTCAAGCAG
CCCGAAGTGC AAAGCATGGT TGGCGTACTG GGTTTTAGCT TTTCGGGCCA GGGTCAAAAC
GCCGCGCTGG CGTTCGTGAC GCTCAAGGAC TGGAAAGAGC GCGCGGGTGA GCAGCATTCG
GCCGGAGCGG TTGCGGGACG GGCCTTCGGT GCGCTCATGG GTGTGCGTGA TGCATTCATC
TTTCCGCTGA GCCCACCGCC GATTCCCGAA CTGGGCACGG CGTCGGGCTT CAGCTTCCGT
TTGCAGGATC GCGGCGGCGC GGGCCACGAG GCGCTCGTCA ATGCCCGCAA CCAGTTGCTG
GGCCTGGCGT CCAAGAGCCC TGTCCTTGGG CAGGTGCGTC CCGATGGCCT GGAAGACGCG
CCGCAACTGC AGATCGACAT TGACCGCGAC AAGGCCAATG CGCTGGGCAT ACCGTTCGAC
GCGATCAATT CGGTGTTGTC GACCTCGCTG GGCTCCAGCT ACGTGAACGA CTTCCCGAAC
CAGGGGCGCT TGCAGCGTGT GGTGGTGCAG GCCGATGCAC CGGCGCGCAT GCAGCCCGAT
GACCTTCTCA AACTGAACGC CAGCAACAGC AAGGGGCAAT CGGTGCCGCT CTCGGCATTT
GCCACGACGC GCTGGGTCAA GGGCGCGATG CAGACGGTGC GCTACAACGG CTATCCGGCG
ATGCGCATCG GCGGCAGCGC CGCACCGGGC TACAGCACCG GCGCCGCGAT GGCCGAGATG
GAGAAGCTGG CGGCGCAGCT GCCGCAAGGC TTCGGCTATG AGTGGACCGG CCAGTCGCGA
GAGGAAAAAC TCGCCGGCTC CCAGGCGACC CTTCTCTATG GTTTCGCGAT CCTCGCGGTG
TTCCTGTGCC TCGCCGCGCT GTACGAAAGC TGGACCATTC CGCTGGCGGT GATTCTGGTG
GTGCCGCTGG GCGTGATCGG CGTGTTGCTG GCGACCCTGC TGCGCGCCTA TTCGAACGAC
GTGTACTTTC AGGTGGGCCT GATCACCATC ATCGGCCTGT CGGCGAAGAA CGCCATTTTG
ATCATCGAGT TTGCGAAAGA CCTTCAGGCG CAGGGCAAGG GCGTGATCGA GTCGGCGCTG
GCCGCAGCCC ATCTGCGTTT TCGCCCCATC ATCATGACCT CGCTGGCTTT CGGCCTGGGC
GTGATGCCTC TCGTGCTGGC TTCGGGCGCC GGCTCTGCTA GCCAGCGCGC CATCGGTACC
GCCGTGATCG GCGGCATGGT GACCGGCACG GCGCTGGCGG TGATTTTTGT CCCGGTGTTC
TTTGTCGTGG TGCGCGGCTT TTTCAAAGGC AGCGAGCGGC AAAACAGGAT CTATTCGGAG
CATGCCAAAG CGGCAGGCAT CTCGGAAGAT GAAGGAAATG AAGGTAAAGC CCATGCGTAA
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| Protein sequence | MAKFFIDRPI FAWVIALFIL VVGGVSITQL PIAQYPPVAP PAIVINTAYP GASAQTLEDS
VLSVIEREMN GSPGLIYMES VAQADGSGSI TLSFQPGTNA ELAQVDVQNR LSRASPRLPA
AVAQQGVRVD KSRANFLLFT MLSSDNPAHD PVALGDYASR NIVPELQRLP GIGQAQLFGS
ERAMRIWLDP AKLTGFSLSA NDVNTAIRAQ NAQVAAGSIG DRPNVAGQGI AATVVVNGQL
ANVGQFGNIV LRANPDGSSV RLKDVARIEL GGQTYATSAR LNGKPAVGIG VQLAPNGNAL
ASAKAVREKM AELQRYFPQG MKWDIPYDSS RFVRISISQV AETLFEAVAL VFLVMFLFLQ
NWRYTIIPTI VVPISLLGTF ATLLALGFSI NVLTMFGMVL VIGIVVDDAI VVVENVERIM
TEEGLPPLEA TRKAMKQISG AIIGVTVVLI SVFVPLAFFA GSTGNIYRQF SAVMVSSIGF
SAFMALSLTP ALCATLLKPV EAGHHHEKTG FFGWFNRGFT RTAKGYESVV ARILKRAARY
LVIYAAIIGA IAVVFLRLPT SFLPNEDQGT LLVNVQLPPG ATYERTLSVM QNVEEFILKQ
PEVQSMVGVL GFSFSGQGQN AALAFVTLKD WKERAGEQHS AGAVAGRAFG ALMGVRDAFI
FPLSPPPIPE LGTASGFSFR LQDRGGAGHE ALVNARNQLL GLASKSPVLG QVRPDGLEDA
PQLQIDIDRD KANALGIPFD AINSVLSTSL GSSYVNDFPN QGRLQRVVVQ ADAPARMQPD
DLLKLNASNS KGQSVPLSAF ATTRWVKGAM QTVRYNGYPA MRIGGSAAPG YSTGAAMAEM
EKLAAQLPQG FGYEWTGQSR EEKLAGSQAT LLYGFAILAV FLCLAALYES WTIPLAVILV
VPLGVIGVLL ATLLRAYSND VYFQVGLITI IGLSAKNAIL IIEFAKDLQA QGKGVIESAL
AAAHLRFRPI IMTSLAFGLG VMPLVLASGA GSASQRAIGT AVIGGMVTGT ALAVIFVPVF
FVVVRGFFKG SERQNRIYSE HAKAAGISED EGNEGKAHA
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