| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2029 |
|---|
| Symbol | tig |
|---|
| ID | 4015325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2102593 |
|---|
| End bp | 2103903 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637941698 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_548857 |
|---|
| Protein GI | 91787905 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.184706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0504057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGA CTGTTGAAAC CCTTGAAAAG CTTGAGCGCA AAATGACGCT GACGCTGCCC
CTCAATACCA TTCAGTCGGA AGTCGATACG CGCCTGAAGC GCTTGGCCCG CACGGTGAAG
ATGGACGGCT TTCGTCCCGG CAAGGTGCCC ATGAATGTGG TGGCCCAGCG TTACGGCTAC
TCGGTGCACT ATGAAGTCAT GAACGACAAG GTGGGCGAGG CTTTTGCCGT GGCAGCCAAC
GAAGCCAAGC TGCGTGTTGC CGGCCAGCCC CGCATCAGCG AAAAAGAGGG TGCCCCTGAA
GGCGAGCTGG TCTTTGACGC CGTCTTCGAG GTCTATCCCG ACGTCAAGAT TGCCGACCTG
ACCCAGGCAG AAGTCGAAAA GGTCAGCGCT GAAGTCAGCG ATGCAGCCAT CGACAAGACT
GTGGACATCC TGCGCAAGCA GCGCCGCACG TTCGCGCAGC GCGCTGCCGA TGCGCCGGCC
CAGGACGGCG ACCGCGCCAC CATCGACTTC GAAGGCAAGA TCGACGGCGA AACCTTTGCC
GGGGGCAAGG CGGAAGATTT CCAGTTCCTG GTCGGTGAAG GCCAGATGCT CAAGGAATTT
GAAGATGCCG TGCGCGGCAT GAAAAGCGGC GAGAGCAAGA CTTTCCCGCT GAACTTCCCG
GCTGACTACC ACGGCAAGGA CGTTGCCGGC AAGCAGGCGG ACTTTCTGGT GACGGTCAAG
AAAATCGAAG CAGCTCACCT GCCCGAAGTC AACGAGGCAC TGGCCAAGTC GCTGGGCATC
GCGGATGGGA CCGTGGAAGC CCTGCGCGCC GACATCAAGA AAAACCTCGA GCGTGAAGTC
AAGTTCCGCT TGCTGGCCCG CAACAAAAAC GCCGTGATGG ACGCGCTGGT GGCCAATGCC
GAACTCGAGC TGCCAAAATC CAGCGTTCAG GCCGAAGTCG ACCGCATGAT CGAAGGCGCG
CGCGCCGACC TGAAGCAGCG CGGCATCAAG GACGCCGACA AGGCACCAAT TCCTGACGAC
GTCTTCCGTC CCCAGGCTGA AAAGCGCGTG CGCCTGGGCC TGGTGGTGGC CGAACTGGTT
CGTGCCAACG GCCTGCAGGC CAAACCCGAG CAGCTCAAGG CCCATATTGA GGAATTGGCT
GCCAGCTACG AAAAGCCCCA GGACGTGGTG CGCTGGTACC TTGGCGACAA CCGCCGCATG
GCTGAAGTGG AAGCGGTTGT CATCGAGAAC AACGTGACGG AGTTTGTCCT GGGTAAGGCC
AAAGTCAACG ACAAGGCCAT CTCTTTCGAC GACCTGATGG GCCAGAACTG A
|
|---|
| Protein sequence | MAVTVETLEK LERKMTLTLP LNTIQSEVDT RLKRLARTVK MDGFRPGKVP MNVVAQRYGY
SVHYEVMNDK VGEAFAVAAN EAKLRVAGQP RISEKEGAPE GELVFDAVFE VYPDVKIADL
TQAEVEKVSA EVSDAAIDKT VDILRKQRRT FAQRAADAPA QDGDRATIDF EGKIDGETFA
GGKAEDFQFL VGEGQMLKEF EDAVRGMKSG ESKTFPLNFP ADYHGKDVAG KQADFLVTVK
KIEAAHLPEV NEALAKSLGI ADGTVEALRA DIKKNLEREV KFRLLARNKN AVMDALVANA
ELELPKSSVQ AEVDRMIEGA RADLKQRGIK DADKAPIPDD VFRPQAEKRV RLGLVVAELV
RANGLQAKPE QLKAHIEELA ASYEKPQDVV RWYLGDNRRM AEVEAVVIEN NVTEFVLGKA
KVNDKAISFD DLMGQN
|
|---|
| |