| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2019 |
|---|
| Symbol | |
|---|
| ID | 4015314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2089691 |
|---|
| End bp | 2090548 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637941687 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_548847 |
|---|
| Protein GI | 91787895 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.682077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACT TGGACCCGCA CCTGTTGCGT GCATTCTTGT CGGTGATTGA CGTCGGCACC
GTCAATGGTG CCGCCGCCGC CCTGCATCGC ACCCAGGCGG CCGTCAGCAT GCAGATCCGG
CGCCTGGAAG ACATTGCGGG CGCTCCGCTG TTTGAACGCT CGCCCAAGGG CCTGACCGCC
AACGCCGAGG GGCGGGTTCT GGAGCCCTAT GCGCGTGAAA TCCTGACCCT CAATGAAGAA
GCCCGGCAAC GCATCAGCGG CCAGCGCATG GAGGGCCGCG TCAAGCTGGG GGTGGTGGAA
GACTTTGCCG CAACGCGGCT GATTGAGATT TTGAAGTCCT TTCGCGACCA GAACCCCAAG
GTGCATCTGG ACCTGATCAT CGCAGGCAAC AGGCAACTGG CTGCGCTGTT TGAGCAGGAC
AAGCTCGACT TGCTGATCTG CGACACCCAG GAGGTGGCGC ACAAGCCCCT GGTTGAATGG
CCCGAGCAGC TGCTGTGGGT GGTGCGCTCT GACCTGACGC TGATGCCGGA CGATGCCTTG
CCGGTAGTCC TGTTCACCGA CGCCTGCCCC TGGCGCACCC GGGTCATGGA GTCGCTGGCC
GACGCCCAGT TGCGCTGGAG CATGGTGTGC GAGGCCTCCA CGCTGGTGGC CATGGCCACC
GCCGTGCAGG TGGGCATTGG CATCGGACCC ATGATTTCAG CCACCATTCC GCCCGGCTGC
CGCGTGCTGG CGGCAACGCC TGAATTCCCG AACCCGATTC AAATCGGCAT TGGGCTGTAT
GCCCGCACCG GAGCCTCGGA GGAAGCGACT TACCTCGCTG ATTTCATGAC CCGCATGCCG
GGCAGGCTGG CGGTTTGA
|
|---|
| Protein sequence | MQDLDPHLLR AFLSVIDVGT VNGAAAALHR TQAAVSMQIR RLEDIAGAPL FERSPKGLTA
NAEGRVLEPY AREILTLNEE ARQRISGQRM EGRVKLGVVE DFAATRLIEI LKSFRDQNPK
VHLDLIIAGN RQLAALFEQD KLDLLICDTQ EVAHKPLVEW PEQLLWVVRS DLTLMPDDAL
PVVLFTDACP WRTRVMESLA DAQLRWSMVC EASTLVAMAT AVQVGIGIGP MISATIPPGC
RVLAATPEFP NPIQIGIGLY ARTGASEEAT YLADFMTRMP GRLAV
|
|---|
| |