| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2017 |
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| Symbol | |
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| ID | 4015348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2087867 |
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| End bp | 2088709 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941685 |
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| Product | farnesyl-diphosphate farnesyltransferase |
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| Protein accession | YP_548845 |
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| Protein GI | 91787893 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCG AGCAGTATGT CCAGCAAAAA GCCGCCGCGT CCGGCAGCAG TTTTTATTAC
GCCTTCCTGT TTTTACCCCC CGAGCGGCGT GCCGCCATCA CCGCGTTTTA TGCCTTTTGC
CGGGAAATAG ACGATGTGGT CGATGAAGTG ACCGACCCCG GCCTGGCCCG GACCAAGCTG
TCCTGGTGGC AGAGTGAGGT GGTCAAGTCG TATGCCGGCA GTCCCACGCA TCCGGTCATG
CAGGCACTGA TGCCGCTGGC CGCGAACTAC GGCATCGAAG CGCGCCATCT GCAGGCCGTC
ATCGAGGGCT GCCAGATGGA CCTGGAGCAG AACCGCTACC TCGACTTCCC CGGCCTCATG
CAGTATTGCC ACCTGGTGGC GGGCATCGTC GGCGAGGTAG CCGCGCGTAT TTTTGGCCAG
ACTGACGAGG CCACCACCGC CTACGCACAC AAGCTGGGCC TGGCCTTCCA GCTCACCAAC
ATCATTCGCG ATGTGGGTGA AGATGCGATG CGCGGCCGCA TCTATCTGCC CATCAACGAG
CTGCAGCAAT TTGATGTGAA GGCGCACGAG ATCCTGAAGC GCCAGTACTC AGAGCGCTTT
ACCGCGCTCA TGCAGTTCCA GACCCAGCGC GCGCTGGCGC TGTATGACGA GGCGCTGGCC
CTGCTGCCCC CGGCCGATCG CCGGGCCCAG AAGCCCGGCC TCATGATGGC CAGCATTTAC
CGCACGCTGC TGCGCGAGAT CGCCGCCGAC GGCTATCAGG TGCTGCACCA GCGGGTCAGC
CTCACACCCT TGCGCAAATT CTGGCTGGCG TGGAAAACGC AGGCCTTCGG ACGGGTGGTT
TAA
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| Protein sequence | MNPEQYVQQK AAASGSSFYY AFLFLPPERR AAITAFYAFC REIDDVVDEV TDPGLARTKL
SWWQSEVVKS YAGSPTHPVM QALMPLAANY GIEARHLQAV IEGCQMDLEQ NRYLDFPGLM
QYCHLVAGIV GEVAARIFGQ TDEATTAYAH KLGLAFQLTN IIRDVGEDAM RGRIYLPINE
LQQFDVKAHE ILKRQYSERF TALMQFQTQR ALALYDEALA LLPPADRRAQ KPGLMMASIY
RTLLREIAAD GYQVLHQRVS LTPLRKFWLA WKTQAFGRVV
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