| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2005 |
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| Symbol | |
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| ID | 4015336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2073924 |
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| End bp | 2076578 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941673 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_548833 |
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| Protein GI | 91787881 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAC TCGAAAAATA CTCCCCCGAA AAACTCGATC AACTCGTCAA GGAAGTTGAC
CTGGGCGGGC GTGAGCCCGG CGGCAAGATC GGGCTGGGTC TGGCCGCTCT TGCGGCGGCG
TGGTCACTGT TCCAGGTCTG GTATGCCTCG CCGCTGCCCT TTATCTTCGG CTTCGGCATT
CTGAACGACA CCGAGGCACG CGCCATCCAT CTTGCATTTG CGATTTTTCT GGCCTTCTGC
GCCTTTCCCG CCTTCAACCA TTCGTCGCGC ACCATCATTC CCTGGTCGGA CTGGTTGCTC
GCGCTGGTGG GTGCTTTTTG CGGTGCCTAC CTTTTTCTGT TTTACAACCA GTTGGCGCTG
CGGCCGGGCT CGCCGACGAC GATGGACATC GTGATCGGCG TGACCGGCGT AGCCGTCATG
CTGGAGGCGA CGCGCCGGGC CATGGGCTTT GGCATGCTGG TGACCACGGG CCTGTTCATG
GCCTTCGTGT TCCTCGGCCC CTACATGCCC GAGGTGTTGC AACACCGCGG TGCTTCGCTG
TCGCGCTTCA TCTCGCACAT GTGGCTGACC ACCGAGGGCG TCTACGGTGT GGCGCTGGGT
GTGTCGGTGC AATTCATTTT CCTGTTTGTG TTGTTTGGCA CCTTGCTGGA CATTGCCGGC
GCCGGCAATT ACATGCTGCA GGTGTCGCTG GCCACCTTGG GTCACCTGCG CGGCGGCCCG
GCCAAGGTGG CGGTGGTGTC GTCGGCGCTC AATGGCATTG TGTCCGGCTC GTCGGTGTCC
AACGTGGTGT CGGGCGGCAT CTTCACCATC CCGCTGATGA AGCGCACCGG CTACTCGGGC
GTCAAGGCCG GCGCCATCGA AGCGGCCTCC TCGATCAACG GACAGATCAT GCCGCCGGTG
ATGGGCGCGG CGGCTTTCCT GATGGTTGAG TACGTGGGGA TTCCGTACGC TGAGATCATC
AAACACGCAG CGCTGCCGGC CGTCATTTCT TATGTGGCCT TGTTTTACAT CGTGCATCTG
GAGGCGCTGA AATATGACCT GAAGCCGCTG GTGCGTGAGC GCCAGCCCAC CTGGCGCCAG
CGTGTGCTGG GCTGGGCGCT TGGCCTGTCG GGTACCGCAG TGGCTGTCGC GGCTGTTTAC
TACGCTATCA CCGCCGTGCA GGCGGTGGCG GGAGGTATGG CGGGCTGGGC CCTGGCTGTG
CTGGCCGGCG CGGCTTATAT CGTGCTGATG GCGTATTCGT CGCGGTACCC GGGCATCGCC
ATCGACGACC CGCTGGCGCC GGATATCAAG CTGCCGCTGC CCTGGCCGAC GGTGCGCGCC
GGCTTGCACT TTTTCATTCC CATCGTGGTG CTGCTGTGGT GCCTGATGGT TGAAGAACTG
TCACCCGGCC TGTCTGCCTT CTGGGCCACC GCCACCGTCA TGGTGATGGT GGTGTTGCAG
CCTTTCATGC TGTCCGTCTT CCGCCCGAAT GCCACAGCGG AGGTCGTGGC CTCCTCGGGC
CAGGCAGAAG CGATGGCGTT CGCGTTGCAG CGCCAGAACC ATGTGGTCAG CGCCTTGCAG
CGCGGCGTAG CCGACCTGTG GCGCGGCCTG GTGCTGGGCG CGCGCAACAT GATAGGCATC
GGCGTGGCCT GCGCCAGTGC CGGCCTGATT GTCGGCGTCA TCACGCTGAC CGGCATGGGG
CTGATGATGA CCGACTTTGT CGAGTTGGTG TCGGCCGGCA ATGTGCTGGT TATGTTGCTG
CTGACGGCGC TGATCTGCCT GATCATCGGC GCCGGTGTGC CGACCACGGC CAACTACATT
CTGGTGGCTA CCCTGATGGC GCCGGTGATT GTGGAACTGG GCGGACGCAG CGGGTTGGTG
ATTCCGCTGA TCGCCGTGCA CCTGTTCGTT TTTTACTTCG GCATCCTGGC CGACGTGACG
CCGCCGGTGG GGCTGGCGTC TTACGCCGCC GCGGCGATCT CCGGCGACGA CCCGAATGCC
ACCGGCTGGC AGGCCACCTG GTACAGCCTG CGCACCACCG TCCTGCCTTT CGTGTTCATC
TTCAACCCGC AGATTTTGCT GATCGGCCTG GGCTCATGGG TCGATGTGGT GCTGGTGTGT
GTGACGGGCG TGGCTGCGTC ATTGCTGTTT GCCGCGGCCA CGATGAAATG GTTTCGCACC
CGCTGCACCT GGCCGGAAGT TGCCATGCTG CTGCTGGCGA CCTTCCTGTT CTTCCGACCT
GACTGGGTGA TTAACCAGTT CTCGCCCAAA TACGTCAAGG CACCGGCCGC TGACATTTAC
AAGGTGGCTG ATGGGCTGCA TGCGGATGAA TGGCTGGTGG TGGGCATTGC CGGCCAGACG
CTGGACGGCG AGCCACTCAC CAAAACAGTG GCGTTGCCGA TGGGCGAGGG CGCCACGGGC
AGGGAACGCC TGCGCGATGG CGGCGTGACG CTCAGCCAGC TGGGGCCCGA CCTGGAGGTG
GCGGCGGTCA AGTTTGGCAG CCGCGCGAAA AAGCTGGGTG TGGAGCAGGG CTACAAGCTG
GTCGAGCTGA AGCTGCCGAA CCCGGCCCGG CCCTCATCGC ATTGGGTGTT CATCCCGGCC
GCGCTGCTGG GCTGGCTGGT GTGGTGGTTG CAGGGGCTGA GGCTGCGCCG GGGCAGGGGG
TTGGCACCCG CATGA
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| Protein sequence | MAQLEKYSPE KLDQLVKEVD LGGREPGGKI GLGLAALAAA WSLFQVWYAS PLPFIFGFGI
LNDTEARAIH LAFAIFLAFC AFPAFNHSSR TIIPWSDWLL ALVGAFCGAY LFLFYNQLAL
RPGSPTTMDI VIGVTGVAVM LEATRRAMGF GMLVTTGLFM AFVFLGPYMP EVLQHRGASL
SRFISHMWLT TEGVYGVALG VSVQFIFLFV LFGTLLDIAG AGNYMLQVSL ATLGHLRGGP
AKVAVVSSAL NGIVSGSSVS NVVSGGIFTI PLMKRTGYSG VKAGAIEAAS SINGQIMPPV
MGAAAFLMVE YVGIPYAEII KHAALPAVIS YVALFYIVHL EALKYDLKPL VRERQPTWRQ
RVLGWALGLS GTAVAVAAVY YAITAVQAVA GGMAGWALAV LAGAAYIVLM AYSSRYPGIA
IDDPLAPDIK LPLPWPTVRA GLHFFIPIVV LLWCLMVEEL SPGLSAFWAT ATVMVMVVLQ
PFMLSVFRPN ATAEVVASSG QAEAMAFALQ RQNHVVSALQ RGVADLWRGL VLGARNMIGI
GVACASAGLI VGVITLTGMG LMMTDFVELV SAGNVLVMLL LTALICLIIG AGVPTTANYI
LVATLMAPVI VELGGRSGLV IPLIAVHLFV FYFGILADVT PPVGLASYAA AAISGDDPNA
TGWQATWYSL RTTVLPFVFI FNPQILLIGL GSWVDVVLVC VTGVAASLLF AAATMKWFRT
RCTWPEVAML LLATFLFFRP DWVINQFSPK YVKAPAADIY KVADGLHADE WLVVGIAGQT
LDGEPLTKTV ALPMGEGATG RERLRDGGVT LSQLGPDLEV AAVKFGSRAK KLGVEQGYKL
VELKLPNPAR PSSHWVFIPA ALLGWLVWWL QGLRLRRGRG LAPA
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