| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1994 |
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| Symbol | |
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| ID | 4015363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2061320 |
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| End bp | 2062597 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941662 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_548822 |
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| Protein GI | 91787870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.209302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTA CCCTTCGCCT CACCGAACAA CTGATTTCCC GGCCGTCTGT CACACCGCTC
GACGAGGGCT GCATCGACCT CCTTTCCGCC AGGCTGGGCG CGCTGGGCTT TGTGTGTGAG
CGCATGGACA GCGGCCCCGA CAGCTTCCGG GTTGTCAACC TGTGGGCAAA ACGCGAAGGT
TTTAACCCTC TGGCCCAGGA AAACCGGGGG CAGTCAGCTA CCAAATCAGC AGCAAATGAG
GGTGAAGCCC ATACGACGCC CATCAAGACG CTGGTTTTCG CGGGTCACAC CGACGTGGTG
CCCACCGGCC CGCTGGAGCA GTGGCACAGC CACCCGTTCA CGCCCAGCCA TCGCAACGGC
GTGCTGTACG GCCGCGGTGC CGCCGACATG AAAACGTCGA TTGCCGCCAT GGTCGTTGCG
GTCGAGGAGT TTCTGGCAGC CCACCCGCAG CCGGGGCTGT CAATTGCCTT CCTGCTCACC
AGCGACGAAG AAGGTCCGGC GACCGACGGA ACCGTGGTGG TGTGCAAGCA ACTGAAGGCG
CGCGGCGAAG TGCTGGACTA CTGCATCGTG GGCGAGCCTA CTTCCGTCAG CCATCTCGGC
GACATGATCA AGAACGGCCG CCGCGGCACC ATGAGCGGCA AGCTGACCAT CAAGGGGGTG
CAGGGCCATA TCGCCTACCC TCACCTGGCC AGGAACCCGG TTCACCTGTT TGCACCCGCC
CTTGCCCAAC TGGTGGCCAC CGAGTGGGAC CAGGGCAACG CTTTCTTTCC CGCCACCAGC
TGGCAGGTGT CCAACATGCA TGGCGGCACC GGCGCCTCCA ACGTGATTCC GGGCGAACTG
GTGGTGGATT TCAACTTCCG GTTCTGCACG GAATCCACGC CCGAGAACCT GCAGCAGCGC
CTGCAGGCAA TCCTGGACCA GCACGAACTC GACTACGACC TGAAATGGAC GGTGGGCGGC
CTGCCTTTTC TGACCACGCC GGGTGAGCTG GTCAACGCGG TACGCGGCGC GATTCACGCG
GAAACGGGCC TGGACACCGA GCTGTCGACA ACCGGCGGCA CCAGCGACGG CCGGTTCATC
GCCAAGGTCT GCCCGCAGGT CATCGAATTT GGCCCGCTCA ATGCAACCAT TCACAAGATC
AACGAGTGTG TGGACGTGAG CTCGCTCGAC CCGCTCAAAA ACATCTACAA GGGTGTCCTG
GAACGGCTGG CTGGCATAAG CGGCATGGCA GGTGCGTCAG GTCTGGCCGC AGTGGCTGAT
TCGACGTCCT CACCATGA
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| Protein sequence | MSATLRLTEQ LISRPSVTPL DEGCIDLLSA RLGALGFVCE RMDSGPDSFR VVNLWAKREG
FNPLAQENRG QSATKSAANE GEAHTTPIKT LVFAGHTDVV PTGPLEQWHS HPFTPSHRNG
VLYGRGAADM KTSIAAMVVA VEEFLAAHPQ PGLSIAFLLT SDEEGPATDG TVVVCKQLKA
RGEVLDYCIV GEPTSVSHLG DMIKNGRRGT MSGKLTIKGV QGHIAYPHLA RNPVHLFAPA
LAQLVATEWD QGNAFFPATS WQVSNMHGGT GASNVIPGEL VVDFNFRFCT ESTPENLQQR
LQAILDQHEL DYDLKWTVGG LPFLTTPGEL VNAVRGAIHA ETGLDTELST TGGTSDGRFI
AKVCPQVIEF GPLNATIHKI NECVDVSSLD PLKNIYKGVL ERLAGISGMA GASGLAAVAD
STSSP
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