Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1992 |
Symbol | |
ID | 4015361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2058300 |
End bp | 2060336 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637941660 |
Product | ABC transporter related |
Protein accession | YP_548820 |
Protein GI | 91787868 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.2468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCC TTAAAAACGT GGTGCTGCGT CGCGGCGCCA AAGTTATCCT CGACAGCGCC TCTGTCAGTC TCAACCCCGG CGAAAAAATC GGCCTGGTGG GCCGCAATGG CGCGGGAAAG TCCTCGCTGT TTGCGATGCT CAACGGCACG CTGCATGAAG ACGGCGGTGA ATACACCATC CCGGCACAGT GGCGCATGTC CCAGGTCGCG CAGGACATGC CTGAGACAGA GCAAAGCGCC ACCAGCTACG TGGTTGAAGG TGACGTGGTC CTGCTGGCTG CGCAGGCTGA AGTGGAGGCC TCCGAGGCCA GCGGCGACGG CGACCGCATG GCCCACGCTT ATATGGAGCT CTACGACGCG GGCGCGCACG ACGCCCAGGC ACGCGCGCAG GCCCTGATTT TGGGCCTGGG CTTCAAGGTC AGCGAGCTCG ACAACCCCGT CAACAGCTTC TCGGGCGGCT GGCGCATGCG CCTGCAGCTG GCGCGCGCCC TGATGTGCCC GTCAGACCTG CTGCTGCTGG ACGAACCGAC AAACCACCTG GACCTGGACG CGCTGGTCTG GCTGGAGGCC TGGCTCAAGC GCTACCAGGG CACCATGCTG GTCATCAGCC ATGACCGGGA GTTTCTGGAT GCGGTAACCG ATGTCACGGT GCACATTGAA AACGCCAAAC TCACACGCTA CGGCGGCAAC TACAGCAAGT TTGAAGACCT GCGTTCGGAA CAGATGGCCT TGCAGCAGAC CGCTTTTGCC AAGCAGCAGG ACAAGATCGC CCACCTGCAG AAATTCATTG CGCGCTTCAA GGCCAAGGCC AGCAAGGCCA AGCAGGCGCA AAGCCGGGTC AAGGCACTGG ACCGCATGGA GAAAATCGCG CCGCTGCTGG CTGAAGCCGA CTTCACCTTC GAGTTCAAGG AGCCGGCCAA CCTGCCTAAC CCCATGCTGT CCATGCAGAA CGTCTACTTC GGCTATCCGC CGCCAGCAGA TGCACCGGAG GGCACTCCGC CTACCGTCAT CGTGCAAAAC GTCAGCAAAT CGGTGCTGGC CGGCCAGCGC ATCGGCATTC TGGGCGCCAA CGGCCAGGGC AAATCGACCG TGGTCAAAAC CATCGCACGC GCGCTGGCAC CTATTCAAGG AGAGATGACC GAAGGCAAGG GCCTGAACAT CGGCTACTTT GCCCAGCAGG AACTGGACGT GCTGCGCCCG GCCGACAACC CGCTGGAGCA CATGATCCGC CTGGTCAAAG AGGTGACTGC CGCCGGCAAG ATCAGCGGCC AGGCCACGCG CGAGCAGGAC CTGCGCAGCT TTCTGGGCAA CTTCAACTTT GGCGGCGACA TGGTCAAGCA GGCCGTGGGC AGCATGAGCG GCGGCGAAAA AGCCCGCCTG GTGCTGTGCA TGATCGTCTG GCAGCGCCCC AACCTGTTGC TGCTCGATGA ACCGACCAAC CACCTGGACC TGGCCACGCG CGAAGCGCTG TCGATGGCGC TCAACGAGTT TGAAGGCACT GTGATGCTGG TCAGCCACGA CCGTGCGCTG CTGCGAGCCG TGTGCGACGA GTTCTGGATG GTCTCGCGCG GCGGCGTGGC CCCGTTTGAC GGCGACCTCG ACGACTACCA GCGCTACCTG CTCGATGAAG CCAAGCGACA GCGCGAAGAG GCTAAAAAGT CGACCAGCAG TGCGGCTGCA CCGGCGACTG CCACCAGCAC CAGCGCTACC AAACCCATAG CTGGGAACGT AAATTCAACC GGAGCCAAAG CCGGTTCCGA TGCCAAAAAG TCATCCGGTA AAAAAGACGA AGCCCAGCGC CGCCAGCAGC AATCCGACGT CACCAAACCG CTGCGCAAGG AACTGGACAA GATAGACAGC CGGCTGCAGT CCCTGAACAC CGAGCGCGAC AGCCTGCAAA CCGCCCTGAC CACCATCACC GCACCGGCAG AAATCGCCCA GGCCGGCAAG CGACTCAAGG CCATTGACAG TGAAATAGGC ACGCTGGAAG AACGCTGGCT GGAACTGACC GAGCAGATCG AGACTGCCAC GGTGTAA
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Protein sequence | MITLKNVVLR RGAKVILDSA SVSLNPGEKI GLVGRNGAGK SSLFAMLNGT LHEDGGEYTI PAQWRMSQVA QDMPETEQSA TSYVVEGDVV LLAAQAEVEA SEASGDGDRM AHAYMELYDA GAHDAQARAQ ALILGLGFKV SELDNPVNSF SGGWRMRLQL ARALMCPSDL LLLDEPTNHL DLDALVWLEA WLKRYQGTML VISHDREFLD AVTDVTVHIE NAKLTRYGGN YSKFEDLRSE QMALQQTAFA KQQDKIAHLQ KFIARFKAKA SKAKQAQSRV KALDRMEKIA PLLAEADFTF EFKEPANLPN PMLSMQNVYF GYPPPADAPE GTPPTVIVQN VSKSVLAGQR IGILGANGQG KSTVVKTIAR ALAPIQGEMT EGKGLNIGYF AQQELDVLRP ADNPLEHMIR LVKEVTAAGK ISGQATREQD LRSFLGNFNF GGDMVKQAVG SMSGGEKARL VLCMIVWQRP NLLLLDEPTN HLDLATREAL SMALNEFEGT VMLVSHDRAL LRAVCDEFWM VSRGGVAPFD GDLDDYQRYL LDEAKRQREE AKKSTSSAAA PATATSTSAT KPIAGNVNST GAKAGSDAKK SSGKKDEAQR RQQQSDVTKP LRKELDKIDS RLQSLNTERD SLQTALTTIT APAEIAQAGK RLKAIDSEIG TLEERWLELT EQIETATV
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