| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1984 |
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| Symbol | tolB |
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| ID | 4015352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2051573 |
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| End bp | 2052853 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637941651 |
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| Product | translocation protein TolB |
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| Protein accession | YP_548812 |
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| Protein GI | 91787860 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.517365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.378967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA CACCATCACT GAGCCGTCGC ACCGTCATGA GTCTGCTGGC GGCGGGCTTG
TCGCCGGCAT TTGCGCAGTT CCGCGTGGAG GTGTCGGGCG TGGGCCTGAC GCAATTGCCA
ATTGCCATCG CTTCCTTCCG GGGGGAGGTG CAGGCGCCGC AAAAAATTGG CAACATTGTC
AGGGCCGATC TTGAACGCAG TGGCATGTTT CGCCCGGTCG ACACCGCGGG CATCGTGGCA
GACGAAAACA CCCGGCCAGA CCTCGCAATC TGGCGGCAAA AGGGCGCGGA TGCGATGGTG
ACGGGCAGTG TCTCGCCCCT GGCCGACGGA CGATTTGATG TGCGGCTTCG CCTGTGGGAT
ATCGTGCGGG GCCAGGACCT CGGAGGGCAG AGCTATACCG TGGCCCAAGC TGATTTGCGC
CTGTCTGCCC ATCGGATTTC TGATTTTGTG TACGAGAAAC TCACGGGTGA AAAAGGCATC
TTTTCAACGC GAATTGCCTA TGTCACCAAA ACGGCCCAAC GCTTTAACCT CTGGGTGGCC
GATTCGGATG GCGAAGGCGC CCAGTCTGCC CTCACCAGCC CCGAGCCCAT CATCTCGCCT
TCCTGGTCGC CCAATGGCTC CCAGCTGGCT TATGTTTCCT TCGAATCCCG CAAGCCGGTC
ATTTATGCGC ATGATGTCGC CACCGGAAAG CGGCGCCTGC TTGCCAATTT CAGGGGCTCC
AACAGCGCAC CAGCCTGGTC ACCCGATGGC AAGCAACTGG TTGCCACGCT GAGCCGGGAC
GGCGGCTCGC AGATATACGC CCTGGGGCTC AGTGGCGGCG ACCCCAAGCG CTTGACCCAG
TCATCCAGCA TTGATACCGA GCCGGCTTAT TCGCCCGATG GGCGATATAT CTATTTCGTC
AGCGACCGCG GCGGCGCTCC GCAAATCTAC CGCATGAGTC CCGGCGGTGG AAATCCGGAA
CGCGTGACGT TTACGGGCGG TTACAACATC TCCCCTGCGA TCAGCCCTGA TGGGCGTTGG
CTGGCCTATG TTTCGAGGGT TGGCGGCGCC TTCAAGCTGC ACGTGATGGA ACTTGCCAGC
GGAACGGCCA CTCCTATTAC CGACACCACG GCCGATGAAA GCCCGAGCTT CGCGCCCAAC
AGCCGCTTGA TCGTGTACGC GACCCAGCAG CAGGGCCGGG AAGCACTGAT GACCACGACG
CTGGACGGCA AGATCAAGGC CAGGTTATCC GGCGCCGGCG GCGACATCCG TGAGCCCGAC
TGGGGACCTT TCCAGCGGTG A
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| Protein sequence | MSITPSLSRR TVMSLLAAGL SPAFAQFRVE VSGVGLTQLP IAIASFRGEV QAPQKIGNIV
RADLERSGMF RPVDTAGIVA DENTRPDLAI WRQKGADAMV TGSVSPLADG RFDVRLRLWD
IVRGQDLGGQ SYTVAQADLR LSAHRISDFV YEKLTGEKGI FSTRIAYVTK TAQRFNLWVA
DSDGEGAQSA LTSPEPIISP SWSPNGSQLA YVSFESRKPV IYAHDVATGK RRLLANFRGS
NSAPAWSPDG KQLVATLSRD GGSQIYALGL SGGDPKRLTQ SSSIDTEPAY SPDGRYIYFV
SDRGGAPQIY RMSPGGGNPE RVTFTGGYNI SPAISPDGRW LAYVSRVGGA FKLHVMELAS
GTATPITDTT ADESPSFAPN SRLIVYATQQ QGREALMTTT LDGKIKARLS GAGGDIREPD
WGPFQR
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