| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1977 |
|---|
| Symbol | |
|---|
| ID | 4015383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2043558 |
|---|
| End bp | 2044772 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637941644 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_548805 |
|---|
| Protein GI | 91787853 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.665081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC CTTCCTTGAG CCCGGTGGAG CATTCAGGCC TCGCCCGGCA GAAACTGCGG
ATCGCGGTTC TCAACCGGAC TTTCTCATCT ACCGGTGGTG GTGCCGAGCG CTATTCCATC
GCGCTGGTCG AGCAATTGTC TGCCGCGCAT GAGGTGCATG TGTTTGCCCA GGAGATCGAT
CACCACTGGC CGGGCGTCAG TTACCACCGT ATTTCTGCGC CTTTGCGCAA GCCCCGCTGG
GTCAACCAGT TGTGGTTTGC CACGGCCACC TGGTGGGCCA CGCGGCGCGG CTTTGATGTG
GTGCATTCCC ATGAAAACAC CTGGCATGGA AACGTCCAGA CGGTTCACGT GTTGCCGGTC
AAATACAACC TGCTCCATGG GATCAGCGGC TGGCGCCTGC TGCTGCGGTG GATCAAGGTC
GTGACCAGCC CGCGTTTACT GACGTATCTA GGGCTGGAGC GCTTGCGGTA TGTGGCCCGC
CCCGGCCGTC AGGTAGTGGT GACCTCTGGC AGCCTGCAGG CCATCATGGC CGCCAGCTAT
CCGGCCTGCA AGGAAATGGT CTCTGTTGTC ACGCCGGGCA TCACGATGCC GGCGCAAGCT
GTGACGCCCG CGCTAAAGCG GGAGGCGCGG GCGCTGCTGG GCTTGCCGGC GCAAGCGCGC
TGCCTGCTGT TTGCAGGCAA CGATTACCGC AAAAAAGGCT TGCAGGCCCT GCTGGAAGCG
ATGGTGCACC TGCCTTCCGA TGTGGTGCTG GCGGTGGTCG GCAACCCGGC GCATATTCCA
GCGTTCAGGG TGCAGGCCGA GGCCTGCAAG CTGGGTGCGC GGGTCTTTTT CCTGGGCTCG
CTGAAGGATG TTGGGCCTGC CTACACAGCC GTGGATGGCC TGGTGCATCC AACGCTGGAA
GATACCTTTG CCATGGTGGT GTTGGAGGCC ATGGCATATG GCCTGCCTGT GGTGGTCAGC
GGCCCTCGCT ATTGCGGTAT TTCCGGGCTG CTGCAGGACG GCGTTAATGC CATGATTCTT
GAGGATCCCC GGGATGCCAA CAAGTTGGCG CAGCTCATTC AGCAGGTGCT GGGCCAGCCA
GCACTTCAAG GCCGGTTGAT GCAGGGTGCC ACCGAGTTCG CCAGGCATTA CCAGTGGCGC
GAGATCGCCT TACAGCAGGA AGCACTGTAT TTTGCGGCGC TGGCCGCCTC GAAAGCGGCC
GGCAGCGCGC AATAG
|
|---|
| Protein sequence | MSLPSLSPVE HSGLARQKLR IAVLNRTFSS TGGGAERYSI ALVEQLSAAH EVHVFAQEID
HHWPGVSYHR ISAPLRKPRW VNQLWFATAT WWATRRGFDV VHSHENTWHG NVQTVHVLPV
KYNLLHGISG WRLLLRWIKV VTSPRLLTYL GLERLRYVAR PGRQVVVTSG SLQAIMAASY
PACKEMVSVV TPGITMPAQA VTPALKREAR ALLGLPAQAR CLLFAGNDYR KKGLQALLEA
MVHLPSDVVL AVVGNPAHIP AFRVQAEACK LGARVFFLGS LKDVGPAYTA VDGLVHPTLE
DTFAMVVLEA MAYGLPVVVS GPRYCGISGL LQDGVNAMIL EDPRDANKLA QLIQQVLGQP
ALQGRLMQGA TEFARHYQWR EIALQQEALY FAALAASKAA GSAQ
|
|---|
| |