Gene Bpro_1952 details

Gene Information

• Locus tag: Bpro_1952
• ID: 4015395
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas sp. JS666
• Kingdom: Bacteria
• Replicon accession: NC_007948
• Strand: +
• Start bp: 2012625
• End bp: 2018915
• Gene Length: 6291 bp
• Protein Length: 2096 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637941619
• Product: superfamily I DNA/RNA helicase
• Protein accession: YP_548781
• Protein GI: 91787829
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1112] Superfamily I DNA and RNA helicases and helicase subunits

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.447363
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAACG AAAAAACAAA CGGTGAATAC CAAGCCAACG ACGCGGACGC TCTCGTAGGA 
GAGCTTTTTT CGGGGGGTAT AACCGTCGGT GATGCGATAG AGAGGCTCAG GACGCGCCTG 
CTGGATCTGT CTGCTCGGAA CCGCCTGCTC AACTACCGGC ACCCCAAGGG GCGGTGCGTC 
CAGATCGCCG AGGCGCCGAA TGTCGACTTG GTGTTCGACC GCCTCTACAT TGACGGCAGG 
GGCGTCCCCT TCAAGTACGT GCCCGAGCCG CCGCCCGACA CCTACGAGGG CAGGCGACCT 
GAGGCGCGGC TTTACGCCCC CCGCGTTGGT ATTTCGACTT CGTTCGAGTT GGCACCAAAT 
CCGGACGGTC CCAACGGGCG CCGGCTCCAC GGGATGCAGA CCTTGCTCTA CCCGGCCGAT 
CTGGAACGCC AACTGCGCAA GATAGCCAGC GAGGCCAAGA CGGCCGTCGA GGAAACCGGC 
TCCAACATGC TATTCCTCGT TTTCGGTTTT CTCGAGTTCT ACGATAGCGA GGACTCGGAG 
CGCCCGATGC TCGCTCCGCT CCTGTCGCTA CCGGCCCAAC TTGTCCGGGG AGAAATCGAC 
AAAGAAACGC GCACCTACCA GTACACCGTT CAGCACAACG GCGAGGATTT AGCCGAGAAC 
CACACCCTAC GCGAGAAACT GCGCCGCGAC TTCATGCTTT CCATCCCCGA GTTCGGCGAG 
GAGGACGAGC CGGAAACCTA TTTCGGTCGC ATCGAGCAGG CGATAAGAAA CAAGCGCCGA 
TGGAAGGTTC GGCGCCAGAT CACGCTCGGC ATGCTCTCCT TTGGCAAGCT GGCGATATGG 
GCCGATTTGG ACACAAAGAA GAATCCTGGC CTCACGGATC ACAAGTTGAT CAAGTCCGTC 
TTCTCCGGGG CATCCGGCGG GGGCGGGGAC GGCGGACTGC ACGCCGAGGA CTACCGAATC 
GATGAGCGAC CTGAGGCCGC GCAGCCGCTC ATCTATGACG CCGACTCGTC CCAGCACAGC 
GCGATCATCG ACGTCCTCTC GGGCAAGAAC CTCGTGGTCA ACGGGCCACC GGGCACCGGT 
AAGTCCCAGA CCATTACGAA CATCATCGCG GCGGCCCTTT CCAAGGGCAA GAAGGTCCTG 
TTCGTATCCG AGAAGCTGGC CGCCCTCGAA GTTGTACGGC ACCGCCTAAA CCACGCCGGC 
CTCGGTCACT TCTGCCTCGA ATTGCATTCA CACAAGACGC AGAAGAAGAA GTTCCTCGAG 
GACGTCCAAG CCCGCATCGA GGAGCGCTTT CCCGCCCCGG CCCAATTCCA GGCCAAGCTC 
GCGACGCTTC AGCGGCAGAA GACCGAACTT GGCCGCTACG CCGAACTGAT GGGCAGCCGC 
GTCGGCAATG CTTTGGGGCT GACGGTCAAC GAGGTGTTCT GGGCTGCCGA GCGACGCAGA 
CAGGATCTTG GCGAGCTTTC CGCCGAGGTC AACGCCATCG GCTTCCCCGA CGCGTCACAG 
TGGACGCACG ACGACATCGA GTCCCGCAGG TCCCGGCTCG CTGGGCTCGC GGAGCTTTAC 
GACGCGACCG GACGGTTCGA CTCCGTCCAT CCCTGGTGGG GTTTCCGGCC CAATCCCCTG 
GCCCCTTCGG ACGACGAGAC GATTGCCAGA ACAGTGCAAC AGGCCTTGGC GCACGCCCGC 
AGCGCCGACG CGGCAGCCGA CGAGGCTGTT GAGTTCTTCG GATTCACGGA ACAGCCGGAC 
ACCGCCGCTG CTGGCAAGAC CAGGGTGGCG CTGGACCTTG CACCCCCAGT GCCTGAAGGC 
GCCGATCCGG CTCTGCTGGC CCGAATGTTC GACGCAGAGT CCGACCCGAA GGGGCAGCGC 
AGTTCGCGAC TGCTCTCGGA CGTGGCCTCC GGCGTGACCA AAACCAGGAG GCTTTTCGAG 
TCCGCTGCCC GCGTGCTGGC CGACGGCGAA AGACTCCCTT TGGAAGAAAC GGAGGAGGCG 
CGGAGACTCG CCGAGAAGCG GAATCTGTCC TCCGCAGTGC TCGCCGCCGA CATCGGCGAC 
GCACTGGAAA CAACGTCTAG GCTCGAGAAG GCCATTGATG TTTTCGAGGC ATCGGCTCTT 
TCCGCCGCAG CCCCCTATGG ACCTGCGGGC AAAACCGCAT TGGAAGCGTT CCTCTCGAAC 
TGTGGGAAAG CCCCGGCGTC GAGGTTGGCC CCGTTCCTGG TGCGCTCCAT AGCCGACCGC 
GCGTCGGCGG TTCTCGCAAC GGCCAAAATT ATTTCCGAAG CCGCCGTGCG GGTCGGCGCC 
ATTGCGGCAC GCCGCGGCCT GGACTTCGAT TCCACGCCGG ATTCCGTCGC GAGGCTTGCC 
GATCCCGACG GTCTCCCCGG CCTCACAAAT AAAACACCGA TCGACGCCGC GGTGCTGGCC 
GAAGCCCAGC GCCTCGCCGC GCGGCCACTT GCCGAAAAGC CTACGGCCGA AATCGAGCGG 
CTCAAATCGC TTCTGGAAGC CGAGACTTCG GCCTGTGCCG ACGCTCTGGC ACGCTGCCGC 
CAAGCCACCG AACGACTCGG AATATCCTTC GACCGCACCG AACGAGCAGT GGCAGAGGCC 
GCGGCCCTCG CCAAGGTCGC CGCGGACGCC CCAGGCGATC TGCTTGATTA CCGCCGATCG 
TCCTTCGGCC ACGCGCGTGC GGGTGAACTA GTCGGAAAGA TCCGCTCCGC GCTCGCCGTC 
GAACGGGACG GCAAAGTAGT GTTCGCTCCT CTGTTCTACC TCGATGCCCT GCCGCCCCCC 
GCGGAAATCA AATCCGCAGT GGCTGCCCTG CGGCGCAAGG AAGGCTTCTT CGCATTTTTC 
GACGGGGAGT GGCGCAAGGC AAAAAAACTG CATGCGGGTC TCTCCAAGGA AAAGCGCAAG 
GTTTCCGGTA GGCAGCGCGC CAATGAGTTG GTCGGCCTAG TTTCGTGGAT CGAGGCACGG 
GAGTCCTTCG TCGCATCTCC CGAACTCAAG GAGTGTTTCG GCGGGCTGTT CCGAGGCATG 
GAAACCGATC CCGACAGGAT CGCCCGGCTC AACGACTGGT ATCTGGCCAG CCGAGCTGCT 
TTGGTCGAAT GCCCCGGCCT TACCGATAGA GTCGACCTGA CAACCATCCC TTCCGACCGG 
ATTTCCGAAC TAGCCGCCAA AGCCGCTTCA GTCCGGGCCG ACGCCGAAAG GTTGGCCGGC 
GCAGAGGCGG CCGTGAGGGA AATCCTCGGA GCCGGCGTTG TCGGATTTCG CGAGGCCAAG 
GGGCGCGGAT GGGACGAGGG CTTGGAGTTG CTTGGCAAGG CGGTGGAGAG CCTCGGGACC 
GTCTCGGGAT TCTTCGCGGC CCGAGCCGAG TCGAACCTCT CACCGAAGGA TGCCCTGCGT 
CTTATGGAGG CCCGATCCGA ACTTGACGCG GCCGCGTCCG ATCTGGCGCT ATTGATGTGC 
GGCGAGAAGA CTCTGCGGGA CGCAGGCGGG GAGGAACTGG GCTGGCTGGC CGACCTGGCC 
GGAGGCCGCT GGTCCGATGC CGTTTTCGCC ATCTCCGCCC AGGCGTCGCT CGCCGCGGAA 
ACGGCATTAC AGGCACTCGT TTTCACCGGG GAGAATCCTC CCCTGTCCGT AGCCGAGGCG 
TTCGCCAAAG CCAAATCCGG ACTCGACGGC GCATGGTCGG CCGTGGCCTC CCTTCCCGCA 
TGGAACCGTT TCGACGGTTG GACCGCGCTG ATCGAATTCG CCAAGGAAGA CGCGGCGGCC 
GCTAGGAACA TCCTCGAAAA GCTTGCACCG TTTGCCAGAG GCGGGGCCTC GGTAGACGAG 
GTTTTCGCGG CGTCTGCCGA AGAGTCCGAG GCCCGCTCCA TCCTAGAGCG CTTCGCCGTA 
TCGGTCGAGG TGTGCCGGAT GCTGGGGGAC GTCTTCCAAG GCGCCGACAC AAACCTAGAC 
CGCCTTTCGC AGACCCACGG ATGGGGCAAC GCCGTGTGCG TGCTCGAACT TCCGATGGAG 
GTGCGCCGGC GCCTGCTGTC GGAAGGCGCC CGGGAAGCGC TGGATGCATC CAAACGACTT 
TACGGCGCGA TTGATCGCGG CTGCAGTGGC GCGAGGCAGC ATATGGAAAG CCTCACGTCC 
TACGGCTCCT TCTCGTGGGA AGAGTGGCAG AAACAGGTGA GAACCGGCTC CGGACGCGAC 
CTGCCTTCCG AAATGGCGGC CCGGCTGAAG GCCGTGGCGG AATCCCCGGG ATCGGTCCTG 
CCATGGTCGA AATATCTCTC GCTCCGGCAG CAGGCGCGGC AGGAGGGGCT GGCCGACTTC 
GTGTCCGCTC TAGAGTCCGG ACGGATGCCT TCAGTGGCTC TAGCCTCGGC CTTTGAATTG 
GCGGGTTACC AGTCCATCGG GCGTTCCGCC TATCAGGCCT TCCCCGAACT TTCTAGGTTC 
AATGGTTCCG CCCACGAGAA GACGCGTTCT GACTACAGGG CGCTCGACGC CGAAATCGTG 
TCGCTGACAG GCAAGGACTT CGCCAGCCAA ATCGAAAAGC GCACGCGCGT GCCCGAAGGC 
CAACGCGGGA CGACAGTCGG AGACTTCACG GACATGCACC TGCTACGCCG GGAAATCAAC 
AAGCAGCGCA GGCACATTCC GATCCGCCAG TTAGTGAAAC GCGCAGGGAA CGCCCTGCAA 
GAACTCAAAC CCTGCTTCAT GATGGGGCCG CTGTCCGTGG CCCAGTATCT TGAGCAGGGC 
GCCCTAAAGT TCGATTTGGT CGTCATGGAC GAGGCGTCCC AACTGCGGCC GGAGGAAGCC 
CTCGGCGCCG TCGCCCGCGG CTCTCAACTG GTCGTGGTTG GCGATCCCAA GCAGCTACCG 
CCTACTAGCT TCTTCGATCG CATGCTCGAC TCGGGGGACG ACGAGGACGA AGACGAGGCA 
CCGGCCGCCA TCAGCGGCAT GGAGAGCATT CTGGACATTT GCCAACAGTT GTTCACGCCT 
GTGCGGAGCC TTCGCTGGCA CTACCGCTCG CACCACGAAT CCCTCATCGC GTTCTCAAAC 
CACCACTTCT ACAAGAACCT GATCGTCTTC CCATCACCCT ATGCCAAGAA TCCTGGCCTC 
GGGGTGAAGT ACCGTTACGT CAGGGGCGGC TCGTACAAGG ACAGGCAGAA CGTGCCCGAG 
GCCCAGCGTC TGGTCGACGC CGTCCTCGAA CACATGATCA AGCGTCCCGA CGAATCGCTT 
GGCGTGGTGA CCCTGAACCA GACCCAGCGC GAACTCATCG AAGAACTGCT CGACAAGAAA 
TTCAAGACCT TCGCGGAAGG GGCGGACTTC ATGGGCCGCT GGGAGACCGA GGGCTGGCCA 
TTTTTCGTTA AAAACCTCGA GAACGTGCAA GGCGACGAAC GTGACGTAAT CTTCATCTCC 
ACCACGTTCG GCAAGGCCCC CGGCACGGAC AAGGTCCGCC AAAACTTTGG GCCCATAAGC 
CGGCCGGACG GCTGGCGCCG TCTCAACGTG CTTTTCACTC GTTCCAAACG CCGCATCGAA 
CTCTTCACGT CCATGGCACC GGAGGACATC GTCGTCGACG AACGCACCCC GCTCGGCACC 
AAGGCGCTAC GTGACTATCT CGACTTCGCC AAGCGAGGCG TGCTGGTCAC GACGGACGAA 
GGCGAGCGCG ATCCGGACAG CGATTTCGAG GTGTCGGTGG CCAACGTGGT CACGGCCATG 
GGCTATGGGG TCAAGCCACA ATTGGGCGTC GCGGGGTTCT TCATTGACAT GGCGGTGCGC 
AACCCAGACC GGCCCGGCGA ATTCCTGGCA GGCATCGAGT GCGATGGGGC GACCTACCAC 
AGCGGCTTCT CGGTCCGCGA TCGCGACCGT ATCCGCCAGG AGATTCTCGA GTCGCTCGGA 
TGGCGGGGAC GCATCCATCG CATCTGGTCA ACCGACTGGT TCTACAACCC GCGCAGGGAA 
ATGGAACGCC TCAGAAACTT CCTTGAAGAA CGCCGCCGCC TGAGCGCGGC TGAGGATCCG 
GGGACATGGG AGGAAGAGGA CTTCGAGGCG GAAAACGAGG CGGTGGAAAA GGTTTCGGAA 
GAGTTGGCCG AGGTCCTGTC GGCCGTAGCA GGTGGAAACG AAGACCTGTT CGTGGAAGTC 
GGGGACCGCG TCACGTACTG CCTGGTAAAC GAACCGAACG ACAGGCACTG CGTCCTCATT 
GTGGACAGCC CGAGCAACGC CAAGATGGGC ATCGTCAACG AGGAGACTCC GCTGGCACAG 
GCGCTTCTCG GGCTTTCGCC GGGAGACGTG GGCGAGTTAG AGGTAGCCGG ACAGAAGAAC 
AGACAACTGC GCGTCCTCAA AGTTCAGCGA CAAGAGGAAC TGCTGGCATG A 

 

Protein sequence

MENEKTNGEY QANDADALVG ELFSGGITVG DAIERLRTRL LDLSARNRLL NYRHPKGRCV 
QIAEAPNVDL VFDRLYIDGR GVPFKYVPEP PPDTYEGRRP EARLYAPRVG ISTSFELAPN 
PDGPNGRRLH GMQTLLYPAD LERQLRKIAS EAKTAVEETG SNMLFLVFGF LEFYDSEDSE 
RPMLAPLLSL PAQLVRGEID KETRTYQYTV QHNGEDLAEN HTLREKLRRD FMLSIPEFGE 
EDEPETYFGR IEQAIRNKRR WKVRRQITLG MLSFGKLAIW ADLDTKKNPG LTDHKLIKSV 
FSGASGGGGD GGLHAEDYRI DERPEAAQPL IYDADSSQHS AIIDVLSGKN LVVNGPPGTG 
KSQTITNIIA AALSKGKKVL FVSEKLAALE VVRHRLNHAG LGHFCLELHS HKTQKKKFLE 
DVQARIEERF PAPAQFQAKL ATLQRQKTEL GRYAELMGSR VGNALGLTVN EVFWAAERRR 
QDLGELSAEV NAIGFPDASQ WTHDDIESRR SRLAGLAELY DATGRFDSVH PWWGFRPNPL 
APSDDETIAR TVQQALAHAR SADAAADEAV EFFGFTEQPD TAAAGKTRVA LDLAPPVPEG 
ADPALLARMF DAESDPKGQR SSRLLSDVAS GVTKTRRLFE SAARVLADGE RLPLEETEEA 
RRLAEKRNLS SAVLAADIGD ALETTSRLEK AIDVFEASAL SAAAPYGPAG KTALEAFLSN 
CGKAPASRLA PFLVRSIADR ASAVLATAKI ISEAAVRVGA IAARRGLDFD STPDSVARLA 
DPDGLPGLTN KTPIDAAVLA EAQRLAARPL AEKPTAEIER LKSLLEAETS ACADALARCR 
QATERLGISF DRTERAVAEA AALAKVAADA PGDLLDYRRS SFGHARAGEL VGKIRSALAV 
ERDGKVVFAP LFYLDALPPP AEIKSAVAAL RRKEGFFAFF DGEWRKAKKL HAGLSKEKRK 
VSGRQRANEL VGLVSWIEAR ESFVASPELK ECFGGLFRGM ETDPDRIARL NDWYLASRAA 
LVECPGLTDR VDLTTIPSDR ISELAAKAAS VRADAERLAG AEAAVREILG AGVVGFREAK 
GRGWDEGLEL LGKAVESLGT VSGFFAARAE SNLSPKDALR LMEARSELDA AASDLALLMC 
GEKTLRDAGG EELGWLADLA GGRWSDAVFA ISAQASLAAE TALQALVFTG ENPPLSVAEA 
FAKAKSGLDG AWSAVASLPA WNRFDGWTAL IEFAKEDAAA ARNILEKLAP FARGGASVDE 
VFAASAEESE ARSILERFAV SVEVCRMLGD VFQGADTNLD RLSQTHGWGN AVCVLELPME 
VRRRLLSEGA REALDASKRL YGAIDRGCSG ARQHMESLTS YGSFSWEEWQ KQVRTGSGRD 
LPSEMAARLK AVAESPGSVL PWSKYLSLRQ QARQEGLADF VSALESGRMP SVALASAFEL 
AGYQSIGRSA YQAFPELSRF NGSAHEKTRS DYRALDAEIV SLTGKDFASQ IEKRTRVPEG 
QRGTTVGDFT DMHLLRREIN KQRRHIPIRQ LVKRAGNALQ ELKPCFMMGP LSVAQYLEQG 
ALKFDLVVMD EASQLRPEEA LGAVARGSQL VVVGDPKQLP PTSFFDRMLD SGDDEDEDEA 
PAAISGMESI LDICQQLFTP VRSLRWHYRS HHESLIAFSN HHFYKNLIVF PSPYAKNPGL 
GVKYRYVRGG SYKDRQNVPE AQRLVDAVLE HMIKRPDESL GVVTLNQTQR ELIEELLDKK 
FKTFAEGADF MGRWETEGWP FFVKNLENVQ GDERDVIFIS TTFGKAPGTD KVRQNFGPIS 
RPDGWRRLNV LFTRSKRRIE LFTSMAPEDI VVDERTPLGT KALRDYLDFA KRGVLVTTDE 
GERDPDSDFE VSVANVVTAM GYGVKPQLGV AGFFIDMAVR NPDRPGEFLA GIECDGATYH 
SGFSVRDRDR IRQEILESLG WRGRIHRIWS TDWFYNPRRE MERLRNFLEE RRRLSAAEDP 
GTWEEEDFEA ENEAVEKVSE ELAEVLSAVA GGNEDLFVEV GDRVTYCLVN EPNDRHCVLI 
VDSPSNAKMG IVNEETPLAQ ALLGLSPGDV GELEVAGQKN RQLRVLKVQR QEELLA