| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1938 |
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| Symbol | |
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| ID | 4015419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1997460 |
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| End bp | 1998998 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637941605 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_548767 |
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| Protein GI | 91787815 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.441696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.123274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAA ACAGAATCAC TATGCGCCGA ATCAGAGAGA CATTGCGCCT GCACCTGCAG
GCAGGGCTGA GCTACAACGA GGTCGGCCGA GCGCTGAAGA TTTCCAAGAG CGCGGCGGGC
AAGTACGTGT CGCTGGCCCG CGTTGCCGGG GTGGACTGGG CGCTCGCTCA GACCCTCACC
GACGAGCAAC TGGAAGCCAG GCTGTATCGT CCGGCGCTGC CGCGCTCGAG CCACCAGTTG
GCCCCCGACT TTGCGCTGGT GCACCAAGAG CTCAAGCGTG CCGGCGTCAC CCTGCAGCTG
CTGTGGGAGG AGTACGCCCG GGGCAACGCG CTGGCCTACA AGTACACAAG CTTTTGCGTC
AAGTACCGGT TGTTCGCGCA GAGCTTGAAG CTCTCGATGC GCCAGGTCCA CATTGGCGGC
GAGAAGCTGT TCGTCGATTA CGCCGGACAG ACCGTGCCGC TGATCAACGC GACCACCGGC
GAGATCACCG CCGCGCAGAT CTTCGTGGCC ACGCTGGGGG CTTCGAACTA TACCTACGCC
TGTGCCACCG CGCGTCAGAC CACCGCTGAC TGGATCGGCG CTCAGGTGCG CGCACTCGAG
TTCATCGGCG GCGTGGTGCG CCTGATCGTG CCCGACCAGA CCCGCGCCTT GATCAAGTAC
CCCGACCGCT ATGACCCCGA GCCCAATCGA ACCTACGAGG AGTTTGCCGC CCACTACGGC
TGCGCCCTGC TGGCCGCGCG TCCAGGTCAT CCCCGTGATA AACCCAAAGT CGAAGGCTCG
GTGCTCCTGG TAGAGAGGTG GATTCTGGCG CGCCTGCGCA ACCGCCGATT CTTCAGCCTA
GGCGAGCTCA ACCGCGCCAT CGCCGAGCTT CTCATCGATC TGAACCAGCG CCCCTTCAAG
AAGCTGCCCG GCTGCAGGAG AAGCGCCTTC GAGGCGCTGG ACGCCCCAGC GCTCAAGCCT
TTGCCGGCTA CCCGCTACGA GGTCAGTCGC TGGAAGAGTG CCAAGGTAAA CATCGACTAT
CACGTCGAGT TCGACGCTCA CTACTACAGC GTGCCACACG CCCTGGTGGG CACGACGGTC
GAGATGCGCA TCACCGACAG CCTGGTGGAG TGCTTTGCGG CCAACCAGCG CGTGGCCTGC
CACGCCTTGA GCCACAAGCG TGGCGCCCAC ACCACGATTG CCGAGCACAT GCCGGCGTCC
CACCGCGCGC ACCTGCAGTG GACGCCCGGC AAGCTGATCG ACTGGGGCAA GCGCATCGGC
GTGAGCACCG CTGCCGTGGT GACCTGGCAG CTTGAGCACC GCCCGCACCC CGAGCAGGGC
TACCGCGCCT GCCTGGGGCT GCAGCGCCTG GCGCGCCAGT ACACGCCCGC TCGGCTGGAG
GCGGCCTGTA CCCGGGCGCT GTCGATCCGC TCACCCACCT ACCGCAGCGT GGCCTCGATC
CTCAAGAACG GGCTGGACCG CCAGCCCTCG TTGTTCACGC CCGCGACGCC CCCGCTGCCG
GTCCACGAGA ACGTGCGCGG CCCCGACTAC TACCACTGA
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| Protein sequence | MPTNRITMRR IRETLRLHLQ AGLSYNEVGR ALKISKSAAG KYVSLARVAG VDWALAQTLT
DEQLEARLYR PALPRSSHQL APDFALVHQE LKRAGVTLQL LWEEYARGNA LAYKYTSFCV
KYRLFAQSLK LSMRQVHIGG EKLFVDYAGQ TVPLINATTG EITAAQIFVA TLGASNYTYA
CATARQTTAD WIGAQVRALE FIGGVVRLIV PDQTRALIKY PDRYDPEPNR TYEEFAAHYG
CALLAARPGH PRDKPKVEGS VLLVERWILA RLRNRRFFSL GELNRAIAEL LIDLNQRPFK
KLPGCRRSAF EALDAPALKP LPATRYEVSR WKSAKVNIDY HVEFDAHYYS VPHALVGTTV
EMRITDSLVE CFAANQRVAC HALSHKRGAH TTIAEHMPAS HRAHLQWTPG KLIDWGKRIG
VSTAAVVTWQ LEHRPHPEQG YRACLGLQRL ARQYTPARLE AACTRALSIR SPTYRSVASI
LKNGLDRQPS LFTPATPPLP VHENVRGPDY YH
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