Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1901 |
Symbol | |
ID | 4015460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1963254 |
End bp | 1963643 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637941570 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_548732 |
Protein GI | 91787780 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.508941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTTC CCGCAGACAA GGATTTCGAC AAAGGCCTCG CCACCCGCAA GCAGGTGATG GGTGAGGAGT TTGTTGCCAA CGCCTTTGGC AAGGCCACCG GTTTTTCCAT GCCCATCCAG CACTACATCA CCCGCAATGC CTGGGGCGAC GTCTGGCAGC GGCCGGGGCT GGACCTGAAG ATGCGCAGCC TGATCACGGT GGCCATGCTG ACCGCGCTGG GCAAGCAGCA TGAGCTCAAG GGCCATGTGC GTGGCGCGCT GAACAATGGC GTGACGCCGG AGCAGTTGCA GGAGGTGCTG CTACACGCTA GTATTTATTG CGGCCTGCCT GCCGCGGTAG AGGCTTTTCG CACGGCGGCT GAGGTGGTGG ATGCGCCCAA AGCCGGTTGA
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Protein sequence | MTLPADKDFD KGLATRKQVM GEEFVANAFG KATGFSMPIQ HYITRNAWGD VWQRPGLDLK MRSLITVAML TALGKQHELK GHVRGALNNG VTPEQLQEVL LHASIYCGLP AAVEAFRTAA EVVDAPKAG
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