Gene Bpro_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1901 
Symbol 
ID4015460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1963254 
End bp1963643 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content62% 
IMG OID637941570 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_548732 
Protein GI91787780 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.508941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTC CCGCAGACAA GGATTTCGAC AAAGGCCTCG CCACCCGCAA GCAGGTGATG 
GGTGAGGAGT TTGTTGCCAA CGCCTTTGGC AAGGCCACCG GTTTTTCCAT GCCCATCCAG
CACTACATCA CCCGCAATGC CTGGGGCGAC GTCTGGCAGC GGCCGGGGCT GGACCTGAAG
ATGCGCAGCC TGATCACGGT GGCCATGCTG ACCGCGCTGG GCAAGCAGCA TGAGCTCAAG
GGCCATGTGC GTGGCGCGCT GAACAATGGC GTGACGCCGG AGCAGTTGCA GGAGGTGCTG
CTACACGCTA GTATTTATTG CGGCCTGCCT GCCGCGGTAG AGGCTTTTCG CACGGCGGCT
GAGGTGGTGG ATGCGCCCAA AGCCGGTTGA
 
Protein sequence
MTLPADKDFD KGLATRKQVM GEEFVANAFG KATGFSMPIQ HYITRNAWGD VWQRPGLDLK 
MRSLITVAML TALGKQHELK GHVRGALNNG VTPEQLQEVL LHASIYCGLP AAVEAFRTAA
EVVDAPKAG