Gene Bpro_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1874 
Symbol 
ID4015471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1936424 
End bp1937236 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content57% 
IMG OID637941543 
ProductLuxR family transcriptional regulator 
Protein accessionYP_548705 
Protein GI91787753 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID[TIGR03020] transcriptional regulator EpsA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.818656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTC CTATATCGCC CACAGGCGAA AATTCTGCGG CCGAGGGCTA TTTGAAGTTG 
ATCAGTCAGG CCGTAGCGAC CGGATGGCGG CATATTGACT TGTTGAACTG GTTGCAGGGC
GACGTCCAGC ATTACCTGCC TCATGACATC CTGCTCGCCG GATGGGGGGA TTTTCGGGAG
GGTTCGATAC ACCACGATGT CCTGTCCAGC CGGCCTGGCG TGCGCTCTTA TGCGGCGGGC
ACGGAGGTGC TTCCGTTCCT GTTGGGGAAA TTCCACGACA GTTGGGTCGC GGCGCAGAGA
AAACCCTGCC GTCTGGATTT CGGTGAATTT GCGTACCTGC TGGGCAATGC CAGCCTGCCT
GGTTCCTTTT CCAGCGTGCT GCGCACGATG CGCTCTGTGT TGATACATGG GATCTGCGAT
GAAAGAGGCC GCCATGAGTG CCTCTATGTG CTGTTAAGGG CAGGCGAAAT TCCCGCTGAG
CCCGCCACGA CGGCCATGGG CGTGCTGATG CCCCACATCG ACACCGCATT GCGGCAGGTC
ACGCACTTGC CGCAACAACA CCAACATCAA CCGCATCGTC AGTCATCGCC GCCTACGCGG
AGTGCCCCGG AGGACTCCTG TGGCTTGAGT GAGCGGGAGA CCCAGATCAT GGCCTGGGTG
GCCATGGGCA AGACCAATTC AGAGATCGGA ACCATTCTGA ATATCAGTGG GTTCACTGTC
AAAAACCACA TGCAGCGCAT CTTTCAGAAA TTGAATGTTT TCAATCGGAC GCAGGCAGTT
TCCAAGGTAA CCAGGGTGGC TCTCAATGGC TGA
 
Protein sequence
MKSPISPTGE NSAAEGYLKL ISQAVATGWR HIDLLNWLQG DVQHYLPHDI LLAGWGDFRE 
GSIHHDVLSS RPGVRSYAAG TEVLPFLLGK FHDSWVAAQR KPCRLDFGEF AYLLGNASLP
GSFSSVLRTM RSVLIHGICD ERGRHECLYV LLRAGEIPAE PATTAMGVLM PHIDTALRQV
THLPQQHQHQ PHRQSSPPTR SAPEDSCGLS ERETQIMAWV AMGKTNSEIG TILNISGFTV
KNHMQRIFQK LNVFNRTQAV SKVTRVALNG