Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1874 |
Symbol | |
ID | 4015471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1936424 |
End bp | 1937236 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637941543 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_548705 |
Protein GI | 91787753 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR03020] transcriptional regulator EpsA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.818656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTC CTATATCGCC CACAGGCGAA AATTCTGCGG CCGAGGGCTA TTTGAAGTTG ATCAGTCAGG CCGTAGCGAC CGGATGGCGG CATATTGACT TGTTGAACTG GTTGCAGGGC GACGTCCAGC ATTACCTGCC TCATGACATC CTGCTCGCCG GATGGGGGGA TTTTCGGGAG GGTTCGATAC ACCACGATGT CCTGTCCAGC CGGCCTGGCG TGCGCTCTTA TGCGGCGGGC ACGGAGGTGC TTCCGTTCCT GTTGGGGAAA TTCCACGACA GTTGGGTCGC GGCGCAGAGA AAACCCTGCC GTCTGGATTT CGGTGAATTT GCGTACCTGC TGGGCAATGC CAGCCTGCCT GGTTCCTTTT CCAGCGTGCT GCGCACGATG CGCTCTGTGT TGATACATGG GATCTGCGAT GAAAGAGGCC GCCATGAGTG CCTCTATGTG CTGTTAAGGG CAGGCGAAAT TCCCGCTGAG CCCGCCACGA CGGCCATGGG CGTGCTGATG CCCCACATCG ACACCGCATT GCGGCAGGTC ACGCACTTGC CGCAACAACA CCAACATCAA CCGCATCGTC AGTCATCGCC GCCTACGCGG AGTGCCCCGG AGGACTCCTG TGGCTTGAGT GAGCGGGAGA CCCAGATCAT GGCCTGGGTG GCCATGGGCA AGACCAATTC AGAGATCGGA ACCATTCTGA ATATCAGTGG GTTCACTGTC AAAAACCACA TGCAGCGCAT CTTTCAGAAA TTGAATGTTT TCAATCGGAC GCAGGCAGTT TCCAAGGTAA CCAGGGTGGC TCTCAATGGC TGA
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Protein sequence | MKSPISPTGE NSAAEGYLKL ISQAVATGWR HIDLLNWLQG DVQHYLPHDI LLAGWGDFRE GSIHHDVLSS RPGVRSYAAG TEVLPFLLGK FHDSWVAAQR KPCRLDFGEF AYLLGNASLP GSFSSVLRTM RSVLIHGICD ERGRHECLYV LLRAGEIPAE PATTAMGVLM PHIDTALRQV THLPQQHQHQ PHRQSSPPTR SAPEDSCGLS ERETQIMAWV AMGKTNSEIG TILNISGFTV KNHMQRIFQK LNVFNRTQAV SKVTRVALNG
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