| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1870 |
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| Symbol | |
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| ID | 4015467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1932213 |
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| End bp | 1932707 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637941539 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_548701 |
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| Protein GI | 91787749 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.18722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAG CATTTCTCAA GTTCGAGCGC TGGTGTACCA GCATTTCCAT GGCGGGAGCC
TGCGGCATGC TGGTGATCGC CTCAACGCTC GGCATGTTTC AGATCATCAC GCGCTTTGTG
CTGGAACAGC CGGCCGAGTG GAGCGAGATC CTGATACGCC TGAGTCTGAT CTGGATGGTA
TTTCTAGGCA TTCCAGCGGC TTTCCGGCAA GGCGCCATGG TCAGCGTGGA CGTGCTTTAC
CGTTGGAGCC CTCCCCGCGT CAAGCGGATC CTGGACTGGG TGGTCGGCCT GGCGGCACTC
ACGCTGATCG CCATCATCAT CTGGTGGGGC TGGGACTATG CAATGCGCGG CCGCGTACAG
TCCATGGCCG GACTCGAATC CATCTCGATG TTCTGGGGCT ATGTAGCCAT GCCAATCGGA
GGACTGTTTT GCGTGATCGG CATTATCGGC AACATGCTGG ATCCGCAGCA CCACGAACTG
GAAACGGCAA CATGA
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| Protein sequence | MKQAFLKFER WCTSISMAGA CGMLVIASTL GMFQIITRFV LEQPAEWSEI LIRLSLIWMV
FLGIPAAFRQ GAMVSVDVLY RWSPPRVKRI LDWVVGLAAL TLIAIIIWWG WDYAMRGRVQ
SMAGLESISM FWGYVAMPIG GLFCVIGIIG NMLDPQHHEL ETAT
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