| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1869 |
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| Symbol | |
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| ID | 4015466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1930844 |
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| End bp | 1932121 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637941538 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_548700 |
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| Protein GI | 91787748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0850712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.204249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG CGATGCTGAC AACCATGGTC GTGTGTTTTG CACTGACGAT CTCCGTTGCC
GTGTCTATCG GCCTGGCGTC CGTGCTCGGC ATCCAGGTTT CGAACTCCAA CATGCTGATC
TCGGTGAAGG AGATGTTCAA TGCGATCAAC AAGTTTCCGC TCGCAGCGAT CCCGTTTTTC
ATCCTGGCCG GAAATTTGAT GGAAACAGGC GGCATTTCAC GCCGACTCGT CGAGTTTGCG
AAGAGCATTG TCGGCGGCGT TCAGGGCGGC CTGCCGATGA CCTGCGTGTT GACCTGCATG
ATTTTTGCCG CCGTGTCGGG TTCATCGGTT GCCACCACAT TTGCCGTCGG TGCCATCCTG
ATTCCCGCCC TGATCAAGCA CGGCTATCCG ACCAGTTATG CGGCTGCCCT GCAGGCCACC
AGCGCCGAAT TGGGCGTGAT CATTCCGCCG TCGATTCCGA TGATTCTGTA TGGCGTCAGC
GCCGAGGTAT CCATCGGCGA ACTGTTCATC GCCGGCGTCG GCCCCGGCAT CTTTATCAGC
CTCGCGCTGA TGGCCTTTGT CTATGTGTAT TGCAAGATCA AGGGCTGGGG GAAAAATGAC
GGCGATGGCC GGCTCAGTTT TGGCAAGGCC ACCTGGCAGG CCGGCTGGGC ACTGCTGATG
CCCGTCATCA TTCTTGGCGG CATTTACGGC GGCATCTTCA CGCCCACCGA AGCCGCGGCG
GTAGCGGTTT TTTATGCCCT GATTGTGGGC ATGGTGATTT ATCGCGAAAT CAATCTGCCG
GCTCTCATAC TTGTCTTGCG TAAATCCGTC CTTTCCAGCG CGGTGATCAT GTTCATCATC
GCCAACGCAG GACTTTTTGC GTTTCTGATC ACCCGGGCGG GCGTACCGGA TGCGATTGGC
CGCTGGCTGG AAGCCGTTCT GCAATCGCCG GCGCTGTTCC TGCTGGGCGT CAACACCGCG
CTGTTCATCA TTGGCATGTT CATCGAAACC AGCGCAGCCA TCATTGTGCT GGCGCCCATC
CTGGCGCCCG TGGCCATGCA TTTCGGCATA GATCCGGTGC ATTTCGGCAT GGTCATGGTG
GTCAACCTGG CGCTGGGCAT GATCACGCCA CCCTTCGGCG TCAATCTGTT TGCGGCCTGT
ACGGTGGCGC GTATTTCACT GGACCGCATC GTCGTGCACC TGCTTCCTTT CGTGCTGGTC
ATCCTGGCCT GCCTGATGGT GATCACCTAT TTCCCGGCGC TGTCGCTCAC GCTGCGCGAT
CTGGTGTACT CCAAGTAG
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| Protein sequence | MTAAMLTTMV VCFALTISVA VSIGLASVLG IQVSNSNMLI SVKEMFNAIN KFPLAAIPFF
ILAGNLMETG GISRRLVEFA KSIVGGVQGG LPMTCVLTCM IFAAVSGSSV ATTFAVGAIL
IPALIKHGYP TSYAAALQAT SAELGVIIPP SIPMILYGVS AEVSIGELFI AGVGPGIFIS
LALMAFVYVY CKIKGWGKND GDGRLSFGKA TWQAGWALLM PVIILGGIYG GIFTPTEAAA
VAVFYALIVG MVIYREINLP ALILVLRKSV LSSAVIMFII ANAGLFAFLI TRAGVPDAIG
RWLEAVLQSP ALFLLGVNTA LFIIGMFIET SAAIIVLAPI LAPVAMHFGI DPVHFGMVMV
VNLALGMITP PFGVNLFAAC TVARISLDRI VVHLLPFVLV ILACLMVITY FPALSLTLRD
LVYSK
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