Gene Bpro_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1830 
Symbol 
ID4015540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1893062 
End bp1894276 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content64% 
IMG OID637941499 
Productribonuclease BN, putative 
Protein accessionYP_548661 
Protein GI91787709 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0291213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC AGCAATCCCT GCAGGCGTTG TTGACCGACC TGTCCCGTTT TCCGTGGCGC 
CATACCGCGC TCACGCTGCG CGACCGTTTT CGCGAAGACC ACATGGGCCT GACGGCCAGC
AGCCTGACCT TCACCACCTC GATCGCCCTG GTGCCCTTCT TCACCGTGGC GCTGGCCATT
TTTACGGCCT TCCCCATGTT TGCCAAACTG CAGGGCGCCC TGCAGGCCTG GCTGGTTCAG
AGCCTGATTC CCGACGACAT CGCCCGGCAG GTGCTGGGTT ATTTGACCCA GTTCAGCCGG
CAAGCCAACA AGCTGGGCAT TGCCGGACTG GCGGTGCTGC TGGTGACCGC GATTGCGCTG
ATTTTGACGA TAGACCGCAC GCTCAACGGG ATCTGGCGTG TCAGGAAGGC AAGGCCGCTG
GCGCAGCGCG TGCTGATTTA CTGGGCGGCC ATTACCCTGG GGCCGCTGCT GCTGGCGGCC
AGCCTGGCGG GGACTTCCTA TGTGCTGTCG GCCTCCCGGG GCCTGGTGGG CGTGATGCCC
ATCAGCCTGC GTTTCCTGCT GGACGTGACC CAGTTTTTCC TGGTGGCCGG CGGCATGGCG
GCGCTGTACC GCTACGTGCC CAATACCTAT GTGAAATGGT CCCATGCCTG GGTGGGCGGG
CTGTTCGTGG CCGCTGGCCT GGAGCTGGGC AAGCGGATTG TCAGCCTCTA CCTCAGTGCG
GTGCCGACCT ACTCGCTGGT TTACGGCGCC TTCGCCACCT TGCCGATCCT GCTGGTGTGG
ATCTACTTCT CCTGGGTCAT CGTGCTGATG GGCGCGGTCA TTGCCGCCTA CCTCCCCAGC
CTGCTGGCCG GCGTGGCGCG CCGGGGCAGC GCGCACGGCT GGTATTTCCA GTTGGCCATC
GAGGTGCTGC AGCAGCTGAA CCTTGCACGT ATCACCGCGC GCAAGGGGGT GAGTGCATCC
CAACTGGCCG AACAGCTCGA GGTCGACGTA CTGCAGCTCG AGCCTGTCCT GGAAACCCTG
GTTGGGCTGG ACTGGGTAGG CCAGCTCAAC GAGGCCGAGG GCGCTGCCGA GTCCCGCTAC
CTGCTGCTGG CCGACCCCGA CACCACGCCC CTGGAGCCCC TGATGCAGCT GCTGCTGCTG
GACAAGGCGG ATTCGGTCAA AAAATTATGG GAAAAAGCCC GTTGGCCAGC AATAAACCTG
CGTGATGCGC TGTAA
 
Protein sequence
MKFQQSLQAL LTDLSRFPWR HTALTLRDRF REDHMGLTAS SLTFTTSIAL VPFFTVALAI 
FTAFPMFAKL QGALQAWLVQ SLIPDDIARQ VLGYLTQFSR QANKLGIAGL AVLLVTAIAL
ILTIDRTLNG IWRVRKARPL AQRVLIYWAA ITLGPLLLAA SLAGTSYVLS ASRGLVGVMP
ISLRFLLDVT QFFLVAGGMA ALYRYVPNTY VKWSHAWVGG LFVAAGLELG KRIVSLYLSA
VPTYSLVYGA FATLPILLVW IYFSWVIVLM GAVIAAYLPS LLAGVARRGS AHGWYFQLAI
EVLQQLNLAR ITARKGVSAS QLAEQLEVDV LQLEPVLETL VGLDWVGQLN EAEGAAESRY
LLLADPDTTP LEPLMQLLLL DKADSVKKLW EKARWPAINL RDAL