Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1830 |
Symbol | |
ID | 4015540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1893062 |
End bp | 1894276 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637941499 |
Product | ribonuclease BN, putative |
Protein accession | YP_548661 |
Protein GI | 91787709 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0291213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCC AGCAATCCCT GCAGGCGTTG TTGACCGACC TGTCCCGTTT TCCGTGGCGC CATACCGCGC TCACGCTGCG CGACCGTTTT CGCGAAGACC ACATGGGCCT GACGGCCAGC AGCCTGACCT TCACCACCTC GATCGCCCTG GTGCCCTTCT TCACCGTGGC GCTGGCCATT TTTACGGCCT TCCCCATGTT TGCCAAACTG CAGGGCGCCC TGCAGGCCTG GCTGGTTCAG AGCCTGATTC CCGACGACAT CGCCCGGCAG GTGCTGGGTT ATTTGACCCA GTTCAGCCGG CAAGCCAACA AGCTGGGCAT TGCCGGACTG GCGGTGCTGC TGGTGACCGC GATTGCGCTG ATTTTGACGA TAGACCGCAC GCTCAACGGG ATCTGGCGTG TCAGGAAGGC AAGGCCGCTG GCGCAGCGCG TGCTGATTTA CTGGGCGGCC ATTACCCTGG GGCCGCTGCT GCTGGCGGCC AGCCTGGCGG GGACTTCCTA TGTGCTGTCG GCCTCCCGGG GCCTGGTGGG CGTGATGCCC ATCAGCCTGC GTTTCCTGCT GGACGTGACC CAGTTTTTCC TGGTGGCCGG CGGCATGGCG GCGCTGTACC GCTACGTGCC CAATACCTAT GTGAAATGGT CCCATGCCTG GGTGGGCGGG CTGTTCGTGG CCGCTGGCCT GGAGCTGGGC AAGCGGATTG TCAGCCTCTA CCTCAGTGCG GTGCCGACCT ACTCGCTGGT TTACGGCGCC TTCGCCACCT TGCCGATCCT GCTGGTGTGG ATCTACTTCT CCTGGGTCAT CGTGCTGATG GGCGCGGTCA TTGCCGCCTA CCTCCCCAGC CTGCTGGCCG GCGTGGCGCG CCGGGGCAGC GCGCACGGCT GGTATTTCCA GTTGGCCATC GAGGTGCTGC AGCAGCTGAA CCTTGCACGT ATCACCGCGC GCAAGGGGGT GAGTGCATCC CAACTGGCCG AACAGCTCGA GGTCGACGTA CTGCAGCTCG AGCCTGTCCT GGAAACCCTG GTTGGGCTGG ACTGGGTAGG CCAGCTCAAC GAGGCCGAGG GCGCTGCCGA GTCCCGCTAC CTGCTGCTGG CCGACCCCGA CACCACGCCC CTGGAGCCCC TGATGCAGCT GCTGCTGCTG GACAAGGCGG ATTCGGTCAA AAAATTATGG GAAAAAGCCC GTTGGCCAGC AATAAACCTG CGTGATGCGC TGTAA
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Protein sequence | MKFQQSLQAL LTDLSRFPWR HTALTLRDRF REDHMGLTAS SLTFTTSIAL VPFFTVALAI FTAFPMFAKL QGALQAWLVQ SLIPDDIARQ VLGYLTQFSR QANKLGIAGL AVLLVTAIAL ILTIDRTLNG IWRVRKARPL AQRVLIYWAA ITLGPLLLAA SLAGTSYVLS ASRGLVGVMP ISLRFLLDVT QFFLVAGGMA ALYRYVPNTY VKWSHAWVGG LFVAAGLELG KRIVSLYLSA VPTYSLVYGA FATLPILLVW IYFSWVIVLM GAVIAAYLPS LLAGVARRGS AHGWYFQLAI EVLQQLNLAR ITARKGVSAS QLAEQLEVDV LQLEPVLETL VGLDWVGQLN EAEGAAESRY LLLADPDTTP LEPLMQLLLL DKADSVKKLW EKARWPAINL RDAL
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