| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1780 |
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| Symbol | |
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| ID | 4015565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1838629 |
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| End bp | 1839606 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637941452 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_548614 |
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| Protein GI | 91787662 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.258886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0122239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGCA GATGGATCAT GGCTGCCGTG GCAGCCTTGC TGGGCAGCTT TTGCCTGGCG
CAAACCCCAA GCACCTGGAA GCTGGCCACG GGTTACCGGG CCGAGTCTTT CCATACGCTA
AACATCATGC AGTTTTCGCG CGATGTCGAG CAGGCCACGG CCGGCCAGCT GCTCATTCAG
GTGCACGCCA ACAACACGCT GGCCAAGCTC AATGACATCA GCCAGGCGGT GCAGCAGGGC
AAAGCCGAGG CCGGTGAAAC CATCATGAGC AGCCTCGCCA AGGACATTGC GATTGCCGGT
GCCGACTCTG TGCCGTTTGT GGTGAACTCC TACAAGGACG CGCAACGCCT GTGGAAGCTG
CAGCGCCCCG GTATTGAAAA GCACTTCACC GAGCGCGGCT TGAAGCTGCT GTATGCCGTG
CCCTGGCCAC CGCAGGGCCT GCACTCCAGC AAGCCGGTTC GGGGCCTGGC CGACTTCAAA
GGCACGCAGA TGCGCACTTA CAACCAGACC ACCTTGCGAA TTGCCGAAAT GCTGGGAGCC
AAGCCGGTTG ACGTTGCCAT GGTCGACGTG GGTCAGGCGC TGACCGAAGG CCGCATGGAC
AACATGATCA CCTCGGCGCT GACGGGGGTT GAAAACAAGG TCTGGGGCTC GATCAGGTAC
TACTACGAGA TCAATGCATG GTTTCCCAAA AACGTGGTGT TTGTCAGCAG CAAGGCCTTT
GAGGCCCTCA GGCCCGAGGT GCGCAGCACC GTCCTCAAGG CTGCAACTGA TGCAGAAGTC
CGCGGCTGGC TGGCCAGCCA GGCGCTGGCC ATGAGCGCTA CGCAAGAGCT GCGTAAAAAC
GGCATCAGGA TTGAGCGCAT TCCCGCAGAC CTGGAGCAGG AAGTCAAGCG CATGGGTGAG
AAGTTTTCGC GCGAGTGGGT ACGATCTGTT GGCAATGAAG CCAACAATAT CTTTGTGCCT
TACTACCTTG TGCAATAA
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| Protein sequence | MKRRWIMAAV AALLGSFCLA QTPSTWKLAT GYRAESFHTL NIMQFSRDVE QATAGQLLIQ
VHANNTLAKL NDISQAVQQG KAEAGETIMS SLAKDIAIAG ADSVPFVVNS YKDAQRLWKL
QRPGIEKHFT ERGLKLLYAV PWPPQGLHSS KPVRGLADFK GTQMRTYNQT TLRIAEMLGA
KPVDVAMVDV GQALTEGRMD NMITSALTGV ENKVWGSIRY YYEINAWFPK NVVFVSSKAF
EALRPEVRST VLKAATDAEV RGWLASQALA MSATQELRKN GIRIERIPAD LEQEVKRMGE
KFSREWVRSV GNEANNIFVP YYLVQ
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