| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1779 |
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| Symbol | |
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| ID | 4015564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1837241 |
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| End bp | 1838551 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637941451 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_548613 |
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| Protein GI | 91787661 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.702911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.013315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTT TGACTATCGG CGGCATCCTG CTGTTTTTGA TGCTGCTGCT CCTGTCGGGC
GGGGTCTGGA TTGCCATGAC CCTGGCGATT TGCGGCTGGG TGGGGCAGGC GTTTTTTACC
ACCACCCAGC CAGGGCTCAA CCTGTTTTCT GCATTTTGGG AAAGCAACGC GAGCTGGGAG
CTGGCCGCCT TGCCGCTTTT CATCTGGATG GGCGAAATCC TGTTTCGTAC CAAGCTGAGC
GAGGAGATGT TTACCGGGCT GGCCCCGTGG CTGGGTCGGG TGCCGGGGCG CCTGTTTCAC
ACCACCATTC TCGGTTGCGG CATTTTTGGG TCGGTATCGG GCTCGTCTGC GGCGACCTGT
GCCACCATTG CCAAGGTGTC CTTGCCTGAG CTTAAAAAGC GCGGCTACAA CGAGAAAATC
GCATTGGGCT CCCTAGCGAC GGCCGGAACC TTGGGCATCC TGATTCCTCC GTCCATCACG
ATGGTGGTTT ACGCCGTTGC AGCAGACGCC TCCATCATCC GGATTTTTCT GGCGGGGTTT
CTGCCGGGGA TCGTTTTGAT GCTGCTGTTT TCGGGCTACA TCGCCTGGTG GTCCATGCGA
AACAAAGCGC AAATGCCGCC TGCGGAACCG GTGACCAGTT TCAGGGAAAA GCTGAGGCTG
TCGAAGAATC TGATCCCCTG CGCATTGCTG ATCATTTTCA TTTGCTGGTC TTTGCTGGCG
GGCTGGGCCA CGGCGACCGA GTGTGCGGCG TATGGCGTGG TGGGGGCGCT GGCTTTGGCT
CTCTGGAGCC GCTCATTGAC CTGGGCCAAC TTTAACGAAG CCCTCATGGG GTCAGCGCGT
ACCAGTTGCA TGATCATGTT CATCCTCGCG GGCGCAGCCT TCCTGACCAA GACCATGGCC
TTCACCGGTG TGCCGAGAGA GCTGGCTGAG TGGGTCGGCT CCCTAAATCT TTCGCCCTAC
AGCCTGATTG CCTGCCTGGT GGTGGTTTAT CTGGTGCTGG GTACCGCGCT GGACGGCATC
AGCATGATTG TTTTGACTGC GGCCGTGGTG ATGCCCATGA TTCAGAAGGC CGGGTTTGAC
CTGGTCTGGT TTGGCATCTT TGTTATTTTG CTGGTCGAGA TTGCCGAGGT GACGCCGCCT
GTGGGCTTCA ATCTCTTCGT GTTGCAAAAC ATGACGGGCA AAGACAGCAA TGTGATTGCC
AGGGCCGCCA TTCCGTTTTT TATGTGCCTG GTGGTTTGCA TCGCGTTGAT CACGCTGTTC
CCGCAGATTG TCACCATCGT GCCCGACCTG GTGATGGGAA AAGTCAAATG A
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| Protein sequence | MDILTIGGIL LFLMLLLLSG GVWIAMTLAI CGWVGQAFFT TTQPGLNLFS AFWESNASWE
LAALPLFIWM GEILFRTKLS EEMFTGLAPW LGRVPGRLFH TTILGCGIFG SVSGSSAATC
ATIAKVSLPE LKKRGYNEKI ALGSLATAGT LGILIPPSIT MVVYAVAADA SIIRIFLAGF
LPGIVLMLLF SGYIAWWSMR NKAQMPPAEP VTSFREKLRL SKNLIPCALL IIFICWSLLA
GWATATECAA YGVVGALALA LWSRSLTWAN FNEALMGSAR TSCMIMFILA GAAFLTKTMA
FTGVPRELAE WVGSLNLSPY SLIACLVVVY LVLGTALDGI SMIVLTAAVV MPMIQKAGFD
LVWFGIFVIL LVEIAEVTPP VGFNLFVLQN MTGKDSNVIA RAAIPFFMCL VVCIALITLF
PQIVTIVPDL VMGKVK
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