Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1778 |
Symbol | |
ID | 4015563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1836614 |
End bp | 1837216 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637941450 |
Product | hypothetical protein |
Protein accession | YP_548612 |
Protein GI | 91787660 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.442336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0573301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTACG TTCTTGATGC GCTTGCTACC GAAGCCAAGG CAAGCTCGCC GGGCGGCACG GCGACGGTGC TTCGCCGGTG GCTGGACTAC ACCTATTTGA TGGCTGCCGC GCTGGGAGCC CTGTGCATCG CACTGATTTG CGTCCTGATG GTCGCCCAGT CGCTGGGTCG GCAGTTCGGC ATCACAACCG GCGCGGTCAA CGACATCGTG TCGTGGCTGT GCGCTGCAGC GGCGTTTTTC ACCATGGCGC ATGCGTTCAA GCATGGCGAC TTTGTGCGGG TGACCTTGTT GCTTGAACAG CTACAGCCCC GAGGCCGCAG GGCGCTTGAG TTAGCCAGTC TGTTTGTTGC GGTTTGCGCC GTGGGCTATC TTGCTTACTG GGCTTGCCGA TTCACGTACC AGAGCTGGGA GTTCAACGAA CTCGCTCAGG GTTTGTTGCC GCTGCCGATA TGGATCCCAC AGTCAAGTTT CGCGCTGGGC TCCGTGCTGC TGCTCATTGC CGTGGTGGAT GAACTGGTCA TTGTTCTGCG GGGTGGCGTT CCGACTTTTG TGCGCCTTGT CGAGGAGCGG CACGCCCAGG GCGATTTTTC GTCAGATCTT TGA
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Protein sequence | MSYVLDALAT EAKASSPGGT ATVLRRWLDY TYLMAAALGA LCIALICVLM VAQSLGRQFG ITTGAVNDIV SWLCAAAAFF TMAHAFKHGD FVRVTLLLEQ LQPRGRRALE LASLFVAVCA VGYLAYWACR FTYQSWEFNE LAQGLLPLPI WIPQSSFALG SVLLLIAVVD ELVIVLRGGV PTFVRLVEER HAQGDFSSDL
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