| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1777 |
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| Symbol | |
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| ID | 4015562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1835640 |
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| End bp | 1836605 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637941449 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_548611 |
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| Protein GI | 91787659 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0643258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TGCTTGTTTC TCTTGCTGCC GTTACGGCGC TGGGCGCTGC CTTTGCGCAA
ACCAAATGGG ATTTACCGTC CGGTTACGGC GTCAATACTC TTCAGGTGCA AAACCTGTTG
CAGTTTGCTG ACGGTGTAGA CAAAGCCACG GCGGGCAAGC TCAAGATCAC CGTGCACGCC
AATGCCTCGC TGTTCAAGGC CAACGAGATC AAGCGCGCTG TGCAGTCGGG TCAAACCCCG
GTGGGTGAGT TCATCTTGTC GGGCGCTTCC AACGAGGCCC CCATTTTTGG TGTGGACTCC
ATTCCTTTCC TGGCGACCAG CTATGCCGAT GCCAAACGGC TCGACACCGC GTCGCGCACG
CTGCTGGTCA AAACCCTGGC GGCGCAAGGC CTCAAGCTGC TCTACACCGT GCCGTGGCCG
CCGCAAGGTC TCTACTCCAG CAAGCCTGTG GCTTCGATGA AGGACCTCAA GAGCACCAAG
ATGCGGGCTT ACAACCCGGC AACAGCCTTG ATCGCCACAT CGGTCGGGGC CCAGCCGGTC
ACCATTCAGC TGGCCGAGTT GCCCGCCGCG CTGGCAACGG GCGGGGTGGA CAACTTTCTG
ACTTCCAGTG CCAGCGGGGT GGACAGCAAG CTCTATGAAA GCGTCAAGTA TTTTTACGAT
GTGAATGCCT GGCTCCCCCG CAATGCGGTG GTGGTCAACC AAAAGGCCTT TGAGGCGCTG
GACCCAGCCG CTCAGGGCGC CGTGCTGCAA CAAGCGGCCA CAGCCGAGCA GCGCGGCTGG
CAGCTCAGCG AGAAAAAAGA TGCGGAGTAC ATGCGTGAGC TGGCAGCCAA AGGCATGAAG
ATCGATACCA CCAGTGATGG CCTGAAAAAG GAGCTGAAAG TCATTGGTGA ACGCATGACG
GCCGATTGGC TCAAGCTGGC GGGTGACGAA GGCAAGGCCA TCGTTGACAC CTACAACAAG
AAGTGA
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| Protein sequence | MKRLLVSLAA VTALGAAFAQ TKWDLPSGYG VNTLQVQNLL QFADGVDKAT AGKLKITVHA
NASLFKANEI KRAVQSGQTP VGEFILSGAS NEAPIFGVDS IPFLATSYAD AKRLDTASRT
LLVKTLAAQG LKLLYTVPWP PQGLYSSKPV ASMKDLKSTK MRAYNPATAL IATSVGAQPV
TIQLAELPAA LATGGVDNFL TSSASGVDSK LYESVKYFYD VNAWLPRNAV VVNQKAFEAL
DPAAQGAVLQ QAATAEQRGW QLSEKKDAEY MRELAAKGMK IDTTSDGLKK ELKVIGERMT
ADWLKLAGDE GKAIVDTYNK K
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