| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1772 |
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| Symbol | |
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| ID | 4015596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1830841 |
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| End bp | 1832136 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637941444 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_548606 |
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| Protein GI | 91787654 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.277268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.123274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC TTGCCATCAC CTCTTTACTG ATTCTTTCGC TGTTCCTCAT ATTGGGCTCG
GGCGTCTGGA TCGGCCTCAC CCTGTCGGGC GTCGCCTGGA TCGGCATGCA GCTTTTTTCC
TCACGCGCCG CCGGCGATGC CATGGCCGTG ACCATCTGGG GCTCTTCATC GAGCTGGACA
CTGACGGCCC TGCCGCTTTT CGTGTGGATG GGAGAAATCC TGTTTCGCAC CAAGCTCAGT
GAAAGCATGT TTAAAGGCCT GGCGCCGTGG GTCAGCCGCC TGCCGGGCGG CCTGCTGCAC
ACCAACGTGA TCGGTTGCAC CATTTTTGCC GCGGTGTCGG GCTCCTCAGC CGCCACCTGC
GCCACCATAG GCAAGATGAC ATTGCCGGAA CTCGCCAAAC GCGGCTACCC CGAAGACATC
ACCATCGGCT CGCTGGCCGG GGCCGGTACG CTGGGCCTGT TGATCCCGCC CTCCATCATC
ATGATCGTTT ACGGCGTCAG CGCCGATGTA TCGATTGCCA AACTCTTTAT CGCAGGCGTT
TTCCCCGGCC TGTTGCTCGC ATCGCTGTTC TCTGGCTACC TAATCGTCTG GGCGCTGATG
AACAAGGGCA AAATCCCGCC GCCCGACGCG GCCATGAGCT TCAGCCAGAA GGTCTACGAA
TCGCGCCACC TGATTCCCGT GGTGCTGCTC ATCAGCGCTG TGCTCGGCTC CATCTACACA
GGTATCGCCA CGGCGACAGA GGCGGCGGCC ATTGGTGTGG TCGGGTCACT GCTGGTATCG
CTGGCGCAAC GCGCAATGAC GTGGACCACC TTCAAAGAGT CGCTGCTGGG CGCCACACGC
CTGTATTGCA TGATTGCGCT GATTCTGGCG GGTGCCGCGT TCCTGACGCT GAGCATGGGC
TACATCGGCC TGCCGCGCCA CCTGGCCGAG TTTGTATCCG GCCTGGGCCT GAGCCCTTTC
CTGCTGATTC TCGCCCTGAG CTTGTTTTAC ATCATTCTGG GCTGTTTTCT GGACGGCATT
TCGATGGTGG TGCTCACCAT GGGCGTCATC CTGCCCACGG TGCAGACGGC GGGCCTGGAC
CTCATCTGGT TCGGCATTTT CATCGTCATC GTGGTGGAGA TGGCGCAAAT TACCCCGCCC
GTCGGATTCA ACCTGTTTGT ATTGCAAGGC ATGACCAAAA AGGAAATCAC CTACATTGCG
CGGGTCACGC TGCCATTCTT CTTCCTGATG TGCGGCATGG TACTGCTGCT GTGGTTTTTC
CCGCAGATAG CGACCTGGCT GCCCGGCAAG ATGTAA
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| Protein sequence | MSELAITSLL ILSLFLILGS GVWIGLTLSG VAWIGMQLFS SRAAGDAMAV TIWGSSSSWT
LTALPLFVWM GEILFRTKLS ESMFKGLAPW VSRLPGGLLH TNVIGCTIFA AVSGSSAATC
ATIGKMTLPE LAKRGYPEDI TIGSLAGAGT LGLLIPPSII MIVYGVSADV SIAKLFIAGV
FPGLLLASLF SGYLIVWALM NKGKIPPPDA AMSFSQKVYE SRHLIPVVLL ISAVLGSIYT
GIATATEAAA IGVVGSLLVS LAQRAMTWTT FKESLLGATR LYCMIALILA GAAFLTLSMG
YIGLPRHLAE FVSGLGLSPF LLILALSLFY IILGCFLDGI SMVVLTMGVI LPTVQTAGLD
LIWFGIFIVI VVEMAQITPP VGFNLFVLQG MTKKEITYIA RVTLPFFFLM CGMVLLLWFF
PQIATWLPGK M
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