| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1752 |
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| Symbol | |
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| ID | 4015615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1813045 |
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| End bp | 1814574 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637941424 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_548586 |
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| Protein GI | 91787634 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.384074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.499289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGG AAAATTTTGC CCCGATCATG TTCGCGGGCC TCGTGCTGAT CATGCTGATC
GGCTTCCCGG TCGCCTTCTC GCTAGCCGCA CTTGGGCTGG GTTCAGGCTT CCTGGCCATT
CAGATGGGCT GGTTCCCGGC CAGCTTCATG TCCAACCTGC CGCTCAACAT GTTCGGCATC
CTGTCGAACG AGTTGCTGCT GGCCATTCCC TTCTTCACCT TCATGGGCGC CATCCTGGAG
AAGTGCGGGC TGGCGGAAGA CATGCTTGAC TCCATGGGCC AGCTGTTTGG CCCGGCCAAG
GGCGGGCTGG GCTACTCGGT CATTATTGTC GGCTTCATCC TGGGCGCCAT CACCGGCACG
GTCGCCGGCC AGGTGATTGC CATGGCGTTG ATCTCGCTGC CCGTGATGAT CCGCTACGGC
TACAACATGC GTTATGCCAC CGGTGTGCTG GCCGCCTCCG GCACCATCAC CCAGCTGGTG
CCGCCCTCGC TGGTGCTGAT TGTCATGGCC GACCAGCTCG GCCGCTCCGT CGGCGACATG
TACAAAGGGG CTTGGGGCCC GTCCATCCTG CAGGTGCTGA TTTTTGCCGG CTATACCTTC
ATGCTGGGTG TCTTCAAACC CCATCATGTG CCAGGCGTGC CCAAAGATGC CCGTACCCTG
AACGGCTGGC CCCTGTGGGC CAAATGCCTG CGCGGCATCA TCCCCTCTGC AATTCTCATT
TTCGCCGTGC TGGGTTCCAT GGGCGGTCTG CCAGGAATCA ACACCGCCAT CGCTACTCCT
ACGGAAGCCG GCGCCATGGG CGTGGTGGGT GCGCTGATCC TGGCGGCCAT GCATAAGCGA
CTGACCCGCG CGCTGATCTG GGAGGCCATG GTCGGTACCA TGCGGCTGAC CGCCATGGTG
GTGTTTATCC TGATCGGCGC TCGCGTCTTT TCCATGGTGT TTCAGGGAGT GGACGGCGCC
AAATGGGTGG AACACATGCT CAGCGGCCTG CCCGGCGGAC AGACGGGCTT CCTGATCGCG
GTCAACCTCT TTATTTTCTT CCTGGCCTTC TTCCTCGACT TCTTCGAGAT CGCCTTCATC
ATCCTGCCCA TGCTGGGGCC GGTGGCCGAC AAGCTGGGCA TTGACCTGAT CTGGTTTGGC
GTGTTGCTGT GCGTGAACAT GCAGACCAGC TTCATGCACC CGCCGTTCGG CTTTGCGCTG
TTTTACCTGC GCGGGATTGC CGACACGCTG TTCAAGGAAG GCCGCATCCC CCAGGCCATC
AAGTCCAGCG ATATCTACCT CGGCGCCATT CCCTGGGTGG CGATGCAGCT GGTGCTCGTG
ACGATTGTGA TTTTCGTGCC GCAAACCGTC ACCGTGTTTC TCGACAAAGA GGAAAAGATC
GACATCGACA AGGTGAAGAT CGAGATGCCC GCTGAAGCCA TCGATGACAA GCCTGCCGAG
CTCAATCCGG GCGAAACGCA GGGACAGCGC GACACGCAGA ATGCCGACGA CGAGCAGAAG
AAGATCGACG ATCTGTTCAA CAAGAAATGA
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| Protein sequence | MQMENFAPIM FAGLVLIMLI GFPVAFSLAA LGLGSGFLAI QMGWFPASFM SNLPLNMFGI
LSNELLLAIP FFTFMGAILE KCGLAEDMLD SMGQLFGPAK GGLGYSVIIV GFILGAITGT
VAGQVIAMAL ISLPVMIRYG YNMRYATGVL AASGTITQLV PPSLVLIVMA DQLGRSVGDM
YKGAWGPSIL QVLIFAGYTF MLGVFKPHHV PGVPKDARTL NGWPLWAKCL RGIIPSAILI
FAVLGSMGGL PGINTAIATP TEAGAMGVVG ALILAAMHKR LTRALIWEAM VGTMRLTAMV
VFILIGARVF SMVFQGVDGA KWVEHMLSGL PGGQTGFLIA VNLFIFFLAF FLDFFEIAFI
ILPMLGPVAD KLGIDLIWFG VLLCVNMQTS FMHPPFGFAL FYLRGIADTL FKEGRIPQAI
KSSDIYLGAI PWVAMQLVLV TIVIFVPQTV TVFLDKEEKI DIDKVKIEMP AEAIDDKPAE
LNPGETQGQR DTQNADDEQK KIDDLFNKK
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