| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1701 |
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| Symbol | |
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| ID | 4015642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1750469 |
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| End bp | 1752343 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941373 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_548535 |
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| Protein GI | 91787583 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.529906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT CTTTTGAGGC TCGCGGCGAC TTTTTGCCTG AAGCAAACAC CGATACCGAC
ATCCTGGGCG TTCCGGACTT TTCCGATGCT CCCGCCGCTG CCGTGGCTAC TTCGCTGGAC
GCCGTTGCAC CCCAACCCAA CGGTTTCGTG AAGCTGGGCC TGGCCAAGGA ACTGCTGCAG
GCCGTGGCCG ACATGGGTTT TACCCAGCCG ACCGCTGTGC AACTCGCCAC CATCCCCAAG
GCCATGCAAG GCCTGGACGC TGACGGCGCC GACCCGAAAG CCAAATTCAC CGACCTGCTG
GTTTCCAGCC AGACCGGCAG CGGCAAGACC GCCGCCTTCC TGCTGCCCGT GCTGCACACT
CTGCTGATGC AGCAGGAAGA AGCCGAGCGC CAGGAACGCG CTGAATTTGA ACGCCTGAGC
GCGGAAGCCA TCGCCAAGGG CGAAGCCCCT CCGAAAAAGC CCAAGCGCAA AGATCCGACC
AATGCCCGCA ACTTCAAGGC CGCCACCCCC GGCGCGCTGA TTTTGTGCCC AACGCGCGAA
CTGGCCCAGC AAGTCTGCGC CGACGCCATT GACCTGGTTC GCCATTGCCG CGGCCTGCGC
ATCGCCAACG TGGTGGGTGG CATTCCTTAC CAGCTGCAGA TTGCCAAGCT GCAAAACGCC
AACCTGGTGG TGGCCACGCC AGGCCGCCTG CTGGACCTGC AGCGCAGCAT GCAGATCAAG
CTCGACCAGG TGCAGTTCCT GGTGGTCGAC GAAGCCGACC GCATGCTGGA CCTCGGCTTT
GCCGATGACC TGACCGAGGT CAACCAGCTC ACCATTGAGC GCAAGCAGAC CATGATGTTC
AGCGCCACGT TTGCGCCGCG CATCATGCAG CTGGCCACGC GCGTCATGCG CACGCCGCAG
CGCGTCGAGA TCGATTCGCC GCACGAAAAG CACACGTCCA TCACGCAGTC ACTGCTGTGG
GCCGACAACA TGACGCACAA GCGCAAGCTG CTGGATCATC ACCTTCGCGA CACCACCATG
AACCAGTCCA TCGTGTTTGC CTGCACCCAG GTGGAATGTG ATGGCCTGGC CAATGACCTG
GTGCAAGAGG GCTTCAGCGC CGTGGCACTG CATGGTGCCC TGGGCCAGGG TCTGCGCAAT
CGCCGCCTGA TGGCTTTCCG CGATGGCCGG GTGCAGGTTC TGGTTGCCAC CGATGTGGCC
GCCCGCGGCC TGGACGTGCC CACCATCACC CACGTGATCA ACTACGGCCT GCCGATGAAA
GCCGAAGACT ATGTGCACCG CATTGGCCGT ACCGGCCGTG CCGGCCGCGA AGGTCAGGCG
ATCACCATTG CCGAGTTCCG TGATCGCCGC AAGATCCAGG ACATAGAGCA CTACATGCAG
CAAAACCTCA AGCCCAGCGT GATTGCCGGT CTGGAGCCGC AGCAGCGTTT TGCACCGACG
TCCGAGCGTC CGCGCGGCAA TTTCGGTGGT GATCGCGGTG GTCGCAGCTT TGGCGGCGGC
GGCGGTGGTG GCTACGCAGG CCGCAAGCCG TCCGGCGGCT TTGGCGGTGG TTCGGGTGGT
GGGTTTGGCG GCAACCGCGA TGACCGCGGC GGCTCCTTCC CGGCGCGTCC TGCGCCGCAG
GGCAACGGGT ATGCCGACCG CACCAGTTTC AATGATCGCG GCCCACGCCG TCAGGACGAC
CGCGGCTTTG GTAACAACAG CGCTGGCTTC ACGCCGCGCG ATGACCGCAA CTTTGGCGCC
CGCAATGAAG GCTTTGCGCC ACGCGCTGAC TTTGCGAACC GCAAACCCGC GTTCGCCAAG
CCTGCGGGCA AGGTGTTTGT GCCACGCGAT GCCGCCAAGA AGGCGGGTAA GTTTGCCAAA
CCGGCTCGTG ACTGA
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| Protein sequence | MTDSFEARGD FLPEANTDTD ILGVPDFSDA PAAAVATSLD AVAPQPNGFV KLGLAKELLQ
AVADMGFTQP TAVQLATIPK AMQGLDADGA DPKAKFTDLL VSSQTGSGKT AAFLLPVLHT
LLMQQEEAER QERAEFERLS AEAIAKGEAP PKKPKRKDPT NARNFKAATP GALILCPTRE
LAQQVCADAI DLVRHCRGLR IANVVGGIPY QLQIAKLQNA NLVVATPGRL LDLQRSMQIK
LDQVQFLVVD EADRMLDLGF ADDLTEVNQL TIERKQTMMF SATFAPRIMQ LATRVMRTPQ
RVEIDSPHEK HTSITQSLLW ADNMTHKRKL LDHHLRDTTM NQSIVFACTQ VECDGLANDL
VQEGFSAVAL HGALGQGLRN RRLMAFRDGR VQVLVATDVA ARGLDVPTIT HVINYGLPMK
AEDYVHRIGR TGRAGREGQA ITIAEFRDRR KIQDIEHYMQ QNLKPSVIAG LEPQQRFAPT
SERPRGNFGG DRGGRSFGGG GGGGYAGRKP SGGFGGGSGG GFGGNRDDRG GSFPARPAPQ
GNGYADRTSF NDRGPRRQDD RGFGNNSAGF TPRDDRNFGA RNEGFAPRAD FANRKPAFAK
PAGKVFVPRD AAKKAGKFAK PARD
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