| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1692 |
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| Symbol | trmD |
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| ID | 4015672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1742546 |
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| End bp | 1743325 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941364 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_548526 |
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| Protein GI | 91787574 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTTG ACGTCATCAC CCTTTTCCCT GAGCTTTTTG GGCCATTTCT GGTCAGTGGC
GTCACCCGCC GTGCCTACGA AACAGGCCTG GTCGAGGTGA AGCTCTGGAA TCCGCGCGAT
TTTGCCGAGG GCAGCTACCG CCGTGTGGAC GACCGGCCGT TTGGCGGCGG ACCCGGCATG
GTGATGATGG CTGAGCCGCT CACACTCTGC CTCGAACAAA TACGTGCCGA GCGTACCGCT
GGCGGCGTGG CAGATGTGCC CACCGTGCTG TTCTCCCCCA TAGGCGAGGC GCTGAACCAT
GCGGGCGTCG AAGCCTGGTC AGCCAGCAGC GGTGCCGTGC TGGTTTGCGG CCGCTATGAG
GGCCTGGACC AGCGTTTCAT CGAAACCCAT ATCGATCGCC AGATCAGCCT GGGCGATTTC
GTGTTGTCCG GCGGCGAGAT CGCCGCCATG GCCCTGCTGG ACGCCGTCGC CCGTTTGCAG
CCCGGCGTGC TGAACGACGA AGGCAGCCAC CAGCTGGACA GCTTCAATCC GGCGCTGGAT
GGCTTGCTGG ATTGCCCGCA CTACACCCGT CCGGAATCCT GGCGCGGCCA GCCTGTGCCG
CCCATCCTGT TGTCCGGCAA CCATGCCCAG ATCGAGCGCT GGCGGCGCGA AGAGCGCCTG
GCGCTGACCC AGCGCCAGCG TCCCGAACTG GTGCAAAAGG CGCGGGCGGC CGGCCATTTG
ACTGCGCGCG ACGAAGCTTT CCTGGCAGAT TTGTTCGAAA ATCCTGAACA AGATGCCTAG
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| Protein sequence | MRFDVITLFP ELFGPFLVSG VTRRAYETGL VEVKLWNPRD FAEGSYRRVD DRPFGGGPGM
VMMAEPLTLC LEQIRAERTA GGVADVPTVL FSPIGEALNH AGVEAWSASS GAVLVCGRYE
GLDQRFIETH IDRQISLGDF VLSGGEIAAM ALLDAVARLQ PGVLNDEGSH QLDSFNPALD
GLLDCPHYTR PESWRGQPVP PILLSGNHAQ IERWRREERL ALTQRQRPEL VQKARAAGHL
TARDEAFLAD LFENPEQDA
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