| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1679 |
|---|
| Symbol | |
|---|
| ID | 4015659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1731851 |
|---|
| End bp | 1733053 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637941351 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_548513 |
|---|
| Protein GI | 91787561 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA TAGCATTTGC CTGGCGTTAC CTGTGGTCCA GGCCGCTGGC CGCCACACTG
AACCTGCTGC TCTTGAGCCT GGGGCTGGCC TCCGTCACCT TCCTGCTGCT GGTCAGCCAC
CAGATCAACC GGGCCTTTGA GCGCGACCTC GCCGGCATTG ATGTGGTGGT GGGCGCCAAG
GGCAGCCCCA TGCAGCTGAT TCTGTCGGGC GTGTTTCACC TGGATGTGCC GACGGGCAAT
GTGCCGCTGG CCGCTGTCAG GGCGCTGGAG AGCCATCCGC AGGTGGCCAA AATCATTCCC
ATCAGCCTGG GGGACAGCTT TCGCGGCTTC CGTGTTGTGG GCACCACGCC CGCCTACATT
TCGCACTATG ACGCCCGGCT GGCGCAGGGG GCGCTGTGGT CACGGCCCAT GCAGGCAGTG
ATTGGCGCGC AGGTCGCCCG GCAAACCGGC CTGAAAGTAG GTGACACCTT TGCGGGAACC
CATGGCCTCG GTGGCGGTGG TGAGGTGCAC GGACAAACCC CCTACACCGT GGCCGGGGTG
CTGGCGCCCG GCGGCACGGT GCTGGACCGC CTGGTGTTGA CCGCGACCGA GTCGGTGTGG
AAGGTGCACG AAACCGACAC GGCACTCGAT GAAGAAGACC AGAAGATTCT CGAAGAGGAG
CGCGAGGTCA CGCTGGCACT GATCCAGTAC AAGACGCCGC TGGCGGCGGT GACTTTTCCG
CGCTACATCA ACAGCAGCAC CGACATGCAG GCGGCGGCCC CGGCGCTCGA AATCACGCGC
CTGCTCAACA TGGTGGGCGT GGGCACCGAT GTATTGCGCG CCCTGGCCGG CGTGCTGCTG
CTCACCGCGG CCCTGAGCGT GTTCATTGCC TTGTGGGGTG CCGTGCGCGA GCGCCGCGCC
GACCTGGCCC TGCTGCGCAT GCTGGGTGCG CCGCCGCGCA AGGTGGCCGG TCTGCTGCTG
TGTGAGGCCC TGTGGCTGGC CATGCTCGCC ACGCTGCTGG GTGTGCTGGC CGGGCAGGGC
CTGACGGCGC TGATCGGCTG GACGCTGCAA CTGGAAAAAT CGGTGCTGAT CGGTGCGCTG
TCGTGGCCGG TCGAGTTGAT CAGTGTGCCG GTACTGGCGC TGGGTGTGGC GCTAGCGTCC
GCGTTGCTGC CCGCCTGGGA GGCCTACCGG GTCAGTGTGT TTGAACTTCT TCAACCAAAG
TGA
|
|---|
| Protein sequence | MKTIAFAWRY LWSRPLAATL NLLLLSLGLA SVTFLLLVSH QINRAFERDL AGIDVVVGAK
GSPMQLILSG VFHLDVPTGN VPLAAVRALE SHPQVAKIIP ISLGDSFRGF RVVGTTPAYI
SHYDARLAQG ALWSRPMQAV IGAQVARQTG LKVGDTFAGT HGLGGGGEVH GQTPYTVAGV
LAPGGTVLDR LVLTATESVW KVHETDTALD EEDQKILEEE REVTLALIQY KTPLAAVTFP
RYINSSTDMQ AAAPALEITR LLNMVGVGTD VLRALAGVLL LTAALSVFIA LWGAVRERRA
DLALLRMLGA PPRKVAGLLL CEALWLAMLA TLLGVLAGQG LTALIGWTLQ LEKSVLIGAL
SWPVELISVP VLALGVALAS ALLPAWEAYR VSVFELLQPK
|
|---|
| |