Gene Bpro_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1677 
Symbol 
ID4015696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1730569 
End bp1731201 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID637941349 
Productferric uptake regulator family protein 
Protein accessionYP_548511 
Protein GI91787559 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.531485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA GGCTTGCAAA CCCGGTAATA ATGCAACTAG ATTGCGTTAT TGTGCAAAAA 
AGCAGAACCA TAAAAGTCCA CGGAACCATG ACCTCCGCGC TCCCAACCCT TGTCCGCACT
GCGGATCCCA TTGATGCATT GCTGTCAGCC CATGGCCTGC GCCGTACCAG CGTTGCACGC
CTGGTGCTGG GCTGGTTGCT GGCGCATCCC GATACCAGCT ATACCCATGG CCAGTTGCAG
GCGGCGCTGT CGGTGGCGAG GGACGGGGAG GGTGAGCAGG TTCAGGGTGG GGCACTGGAC
CGCGTGACGC TTTACCGCCT GATTGACCGC CTGACGCAGG TGGGCCTGTT GTTGTGCCGG
GTGGACGTGA ACCGGGTGCG CCGCTACCAG GCCATGCCCG CCAGTGTGCA TGCCATCCCG
CACTTTGAAT GCCAGAGCTG CCACCGCGAC AGCCCGCTCG CGGGTGCACT CGAAGCCAAT
GCCAGGGACC TGGAACGCGC CGCGCAAACC GCACTGGAGG CGCTCCAGGC TTTGGGCTAC
CAGGGCACGA GCATGGACTT TGCGGTGCGG GGCGTGTGTG CCGACTGTGT GGCCGCTACT
GCTACTGCTG ATTCGCGGGG CATGACCGCG TGA
 
Protein sequence
MAERLANPVI MQLDCVIVQK SRTIKVHGTM TSALPTLVRT ADPIDALLSA HGLRRTSVAR 
LVLGWLLAHP DTSYTHGQLQ AALSVARDGE GEQVQGGALD RVTLYRLIDR LTQVGLLLCR
VDVNRVRRYQ AMPASVHAIP HFECQSCHRD SPLAGALEAN ARDLERAAQT ALEALQALGY
QGTSMDFAVR GVCADCVAAT ATADSRGMTA