| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1672 |
|---|
| Symbol | |
|---|
| ID | 4015691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1726320 |
|---|
| End bp | 1727207 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637941344 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_548506 |
|---|
| Protein GI | 91787554 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.57433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTC GCCACCTCCG CTATTTTCTG GTCCTGGCCG AAGAACTGCA CTTCGGCCGG
GCCGCGCGGC GCCTGTCGAT TTCGCAGCCG CCGCTGTCGC TGAACATCCA GCAGCTGGAG
GCCTCTGTCG GCGCGAAGCT GTTCACCCGC AACAGCAAGG CGGTGCAATT GACGGCGGCG
GGGCTGGCCT TTGTGCCGGC GGCGCGTGCG CTGATTGACC AGGCCGCGCA GGCGGCCAGC
CACGCGCGCG ACGTGGGGCA GGGCATGGCC GGCAGCCTGG CCATCGGGTT TTCCGGCACC
ATGCTTTACA GCGGCTTGCC CAACATCCTG GAGCGCTTCC AGGCCGAGCA TCCTTTGCTG
CGGCTGACGC TGAAGGAGCT CAGCTCCAGC GAGCAGCTGA TCGAGCTGGC GCATGACCGG
CTGGACCTCG GCTTTGTGCA CACCACGCGC GTGCCGCCCG AGCTGTCGCA GATCCTCGTG
TCCAGCCAGG CGTTTGTGTG TTGCCTGCCG GCGGGCCATG CGCTGGCGCG CAAGCGCTCC
TTGTCACTCA AGCAGTTGCA CGGCGAGGCG TTTGCCGTGG TGTCGCGTGC GGTGTCGCCT
GACTACCACG AGCGCATCCT GGCGATCTGC ACCGAAGCCG GCTTTTATCC GGAATTCCGC
TACGAACTGC GGCACTGGCT GAGCGTGGTG TCGCTGGTGT CGCAAGGCAT GGGCGTGGCG
CTGGTGCCGG CGGCGCTGCG GCAGTCGGCC ATGGCCGGCG CGGCCTTTGT CCCGCTGGAT
GCCGTCACCA CGCCTTACGA CACGCACTGC CTCTGGAAGA CTGCGCGCGA CCACCAGTCG
CTGGCGGCCT TTGTGAAAGC GGTGCGCGCC ATCGCGCCGC CCGTCTGA
|
|---|
| Protein sequence | MEFRHLRYFL VLAEELHFGR AARRLSISQP PLSLNIQQLE ASVGAKLFTR NSKAVQLTAA
GLAFVPAARA LIDQAAQAAS HARDVGQGMA GSLAIGFSGT MLYSGLPNIL ERFQAEHPLL
RLTLKELSSS EQLIELAHDR LDLGFVHTTR VPPELSQILV SSQAFVCCLP AGHALARKRS
LSLKQLHGEA FAVVSRAVSP DYHERILAIC TEAGFYPEFR YELRHWLSVV SLVSQGMGVA
LVPAALRQSA MAGAAFVPLD AVTTPYDTHC LWKTARDHQS LAAFVKAVRA IAPPV
|
|---|
| |