| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1668 |
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| Symbol | |
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| ID | 4015687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1722028 |
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| End bp | 1723257 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637941340 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_548502 |
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| Protein GI | 91787550 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.223118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.732087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT GGGTCCCATG GGCTGTGGCC CTGCTCGTCG TCCTGCTCGT GGTGGGCGGC
GTGCTGCGCG CCCTGTCGGC CCGCAAGGCC CAGCAGCAGG CGCTGGCCGC CGCCAGCGTG
GCCAAGGACC TGGGCCTGGT CGAGCTCGCG GCCACCGACG TGGTCAAGGC CGCGCCGCGC
GAGGTGCTGC AAGGCCTGGC GGTCTCGGGC GCGCTCAAGG CCGTCAACTC CGCCGTGATC
AAGGCCCGCG TGGCCGGAGA ACTGCAGGGC CTGACGGTGC GCGAAGGCGA CTTCGTCAAG
GCCGGCCAGG TGATTGCGCG CATTGATGCC AGCGAATACC AGTCGCGCGT GCGGCAGGCG
CGGGAGCAGG CCGAATCAGC CCGGGCGCAA GTCGAGGTGG TGCAACGCCA GTACGACAAC
AACAAGGCGC TGGTAGACCA GGGCTTCATT TCCAAAACCG CACTGGACAC CTCGCTGGCC
AACCTCAATG CCGCGAAATC CACCTACCGG GCGGCGCTGG CAGCCACCGA CGTTGCGGCC
AAATCGGTGG ATGACACGGT GCTCAGGTCG CCCATCTCGG GCCAGGTGTC GCAGCGCCTG
GCGCAGCCGG GCGAACGGGT GGGCATCGAT GCGAAGATTG TGGAAGTGGT CGACCTGAGC
CGGCTCGAAC TCGAGGCCAC CCTGAGCGCG ACCGACTCCA TGGACGTGCG CGTCGGCCAG
CGTGCCGACT TGCAGATGGA AGGCAGCCGG CAGCCAGTCA GCGCTCGCGT GGTGCGCATC
AACCCCAGCG CGCAGGCCGG CAGCCGCAGC GTGCTGGCCT ACCTCGCCAT CGAAAACACG
CCCGGCATCG GTGAAAGCAC TGCCCTGCCC CTGCGCCAGG GCCTGTTCGC GCAGGGCACG
CTGGGCACGT TACGCGCGCA CATGTTGGCA GTGCCCGTCA GCGCGGTGCG CACCGACAAG
CCGGCGCCCT ATGTGCAGGC CATTGAAAAC GACCAGGTGG TGCACCGGGC GGTGGAGCCG
GGCGCGCGCG GAACGTCTGG CAACGAAGCG GTCGTGGCCG TCAAAGGCCT GGCGGAAAAC
ACGCTGGTGA TCCGGGGTGA AATCCCGACC TTGCGTGAAG GCACCCGGGT CCGGTTCACG
CAGATGCCAG GCACACAGGC CGGCGCCGCG GCGAATCCCG CCGGCAATGC GCCAGCAGTG
ACGCCAGCCT CCGCCAAGCC GGCCCCCTGA
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| Protein sequence | MKRWVPWAVA LLVVLLVVGG VLRALSARKA QQQALAAASV AKDLGLVELA ATDVVKAAPR
EVLQGLAVSG ALKAVNSAVI KARVAGELQG LTVREGDFVK AGQVIARIDA SEYQSRVRQA
REQAESARAQ VEVVQRQYDN NKALVDQGFI SKTALDTSLA NLNAAKSTYR AALAATDVAA
KSVDDTVLRS PISGQVSQRL AQPGERVGID AKIVEVVDLS RLELEATLSA TDSMDVRVGQ
RADLQMEGSR QPVSARVVRI NPSAQAGSRS VLAYLAIENT PGIGESTALP LRQGLFAQGT
LGTLRAHMLA VPVSAVRTDK PAPYVQAIEN DQVVHRAVEP GARGTSGNEA VVAVKGLAEN
TLVIRGEIPT LREGTRVRFT QMPGTQAGAA ANPAGNAPAV TPASAKPAP
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