| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1638 |
|---|
| Symbol | |
|---|
| ID | 4015735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1692391 |
|---|
| End bp | 1693905 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637941310 |
|---|
| Product | transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II |
|---|
| Protein accession | YP_548472 |
|---|
| Protein GI | 91787520 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.414253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.503505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCG CCCAGCCCCC CCTCGCCGAC AACGACTGCT ACCTCGCCCT GAAGGCGCGG
GACGCACGCT TTGACGGCAG TTTTTTTACC GGTGTTACAT CCACCGGCAT CTACTGCCGG
CCGGTCTGCA GCGTCAAAAC ACCCAAGCGC GAAAACTGCC GGTTTTTCAG CCATGCGGCA
CAGGCCGAAA GCGCCGGCTT TCGTCCCTGC CTGCGCTGCC GGCCCGAACT GGCGCCGCAC
TCGGTGGTGT GGTCCATCCA GGACGCGTCC TACATCCTGG CCCACCAGGC GGCCCGCCTG
CTGGACGAGC CTGAGCTGTC CGACGAAGCC CCTTCGGTCG AAAAACTGGC GGCGCGGCTG
GGCGTGAGCG ACCGCCACGT GCGGCGGATT TTCGAGGCGC AGTTTGGCGT GTCGCCCATG
CAGTACCTGC AGACGCGCCG GCTGCACACC GCCAAGCAGT TGCTGGCCGA TACCAGCCTG
CCCATCACGC AGGTTGCGCT GATCAGCGGC TTTGCCAGCG TGCGGCGCTT CAATGCCGCC
TTTGTCGAGC ACTACAAGCT AAACCCCACG CAGCTGCGGC GCCAGGGGGT GAGCGATGCC
GGCCACATCA ACGGCACCGC GCCGGGCATC ACCATCCGGC TGGGCTACCG GCCCCCTTAC
GACGTGGCGG CCATGCTCGG ATTTTTTAGC AAACGCACCA TCAGCGCTAT TGAATTCGTG
GCTGCCGATG CGCAACACCC CTCGATAGGC AGGACATTTC GTGTGGAGTC GGGCGGCAAG
GTACATGCCG GCTGGCTGCT GGCGGCCTTT GATGAAACCC GTTCCCGGCT GGTGCTCAAC
GTCAGCGACT CGCTGCGCGA GGTGCTGCCG CTGGTGATTC GCCGGGTGCG CGCCACGTTT
GACCTCGACG CCGACCCTGC GGCCATCAAC AGCGTGCTGC ATGCCGGCTT TCCGCAGGGC
GATGGCCTGC GCGTGCCCGG TGCGCTCGAT GGCTATGAGC TGGCCGTGCG CGCGGTGCTG
GGCCAGCAGA TCACCGTGGC CGCGGCGCGC ACGCTGGCGC AGCGCATGGT CGACCGCTTT
GGCGAGCCGG TGCAAACCCC CTGGCCGCAG CTGACCCGGC TGTTCCCGGC GCCTGCCATG
CTGGCCGCCG CCAGCGGCGA TGCGCTGGGG CAGCTCGGCA TAGTCAGGCA GCGCCAGGCC
GCCATTGTGG GCATTGCGCA AGCGGTGGCC GACAAACGCC TGCAGCTGCA CAGCGGCGCC
GATGTGCATG CCACGCTGGA GGCGCTGAAG GCCTTGCCCG GCATCGGCGA CTGGACCGCG
CAGTACATCG CCATGCGCGC CCTGCGCTGG CCCGATGCGT TTCCGGCGGG CGATGTGGCG
CTGCACAAGG CGATGGGCGT GCAGGGACTG AAAAATCCGG CCCGGGAAGC CGAGTTGGCC
TCGCATGCGT GGAAGCCCTG GCGCAGCTAT GCCGTGATCC GCGCGTGGAG CGGCACGCTG
GAGCGGCCCG GTTGA
|
|---|
| Protein sequence | MTSAQPPLAD NDCYLALKAR DARFDGSFFT GVTSTGIYCR PVCSVKTPKR ENCRFFSHAA
QAESAGFRPC LRCRPELAPH SVVWSIQDAS YILAHQAARL LDEPELSDEA PSVEKLAARL
GVSDRHVRRI FEAQFGVSPM QYLQTRRLHT AKQLLADTSL PITQVALISG FASVRRFNAA
FVEHYKLNPT QLRRQGVSDA GHINGTAPGI TIRLGYRPPY DVAAMLGFFS KRTISAIEFV
AADAQHPSIG RTFRVESGGK VHAGWLLAAF DETRSRLVLN VSDSLREVLP LVIRRVRATF
DLDADPAAIN SVLHAGFPQG DGLRVPGALD GYELAVRAVL GQQITVAAAR TLAQRMVDRF
GEPVQTPWPQ LTRLFPAPAM LAAASGDALG QLGIVRQRQA AIVGIAQAVA DKRLQLHSGA
DVHATLEALK ALPGIGDWTA QYIAMRALRW PDAFPAGDVA LHKAMGVQGL KNPAREAELA
SHAWKPWRSY AVIRAWSGTL ERPG
|
|---|
| |