Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1622 |
Symbol | |
ID | 4015719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1673714 |
End bp | 1674883 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637941294 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_548456 |
Protein GI | 91787504 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.810291 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TTTCTACCCC TTCCCTCTTG GCCCTGTCCT GTGCCTTGCT CGCTGCCTCA GTCGCCCAGG CGCAGAGCAG CGACACCATC AAGGTCGGCC TGATGCTGCC CTATACCGGC ACCTTTGCCC AGCTCGGCGT GGCCATCGAA AACGGCTTCA AGCTGTTTGT GCAGGAACAG GGTGGCGCGC TCGCCGGCAA GAAGATCGAG TTCTTCAAGG TCGACGATGA GTCCGAGCCG TCCAAGGGCA TCGAAAACGC CAACAAGCTG GTTCAGCGCG ACAAGGTGGA TGTGTTGATT GGCACCGTGC ACTCCGGCGT TGCCATGGGC ATGGCCAAGG TGGCGAAAGA CACCAAGACC CTGCTCATCA TTCCGAATGC GGGGGCAGAC GTGATCACCG GGTCTTTGTG CGCACCCAAC ATCTTTCGCA CCTCGTTCAC CAACTGGCAA CCGGCCTACG CCATGGGACT GGTGGCCGCC GAGCGCAAAC ACAAGAGCGC CGTCACCATC ACCTGGAAGT ATGCAGCCGG CGAGGAGTCG GTCAAGGGCT TCAAGGAGGG CTTTGAAGCC AAAGGCGGCA AGGTCACCAA GGAGCTGAGC GTGCCTTTCC CGACGGTGGA ATTCCAGGCC TTGCTGGCCG AAATCGCCGC GGCGAAGCCC GATGCCGTCT ACACGTTTTT TGCGGGTGCG GGTGCCGTCA AGTTTGTCAA GGACTATGCC GCCGCCGGCC TCAAGGGCAA GATTCCTCTG TACGGCGCAG GCTTTCTGAC CGACGGCACG CTGGAGGCGC AGGGAGACGC GGCCACGGGC CTGCTCACCA CCCTGCACTA TGCCGATGGC CTCGACACGC CGAAAGACCG CGCCTTCCGT CTCAGCTACG CCAAGACCTA CAAGCTGCAG CCCGATGTGT ACGCGGTCCA GGGTTACGAC GCGGCGCAAA TGCTGGCGGC CGGACTGAAA GCCGCTGGCG GCGACTTCAG CAAGCGCGAG GTGCTCATCA AGGGCATGGA GCAGGCAAAG ATCGACAGCC CGCGTGGCGC GTTCACCCTG TCAAAGGCGC ACAACCCGGT GCAGGACATC TACCTGCGCA AAGTCGAGAA CAAGGAAAAC AAAATGGTCA GTGTCGCCGC CAAGGGGCTG GCGGATCCTG CGCGCGGTTG CCGCCTGTGA
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Protein sequence | MKKLSTPSLL ALSCALLAAS VAQAQSSDTI KVGLMLPYTG TFAQLGVAIE NGFKLFVQEQ GGALAGKKIE FFKVDDESEP SKGIENANKL VQRDKVDVLI GTVHSGVAMG MAKVAKDTKT LLIIPNAGAD VITGSLCAPN IFRTSFTNWQ PAYAMGLVAA ERKHKSAVTI TWKYAAGEES VKGFKEGFEA KGGKVTKELS VPFPTVEFQA LLAEIAAAKP DAVYTFFAGA GAVKFVKDYA AAGLKGKIPL YGAGFLTDGT LEAQGDAATG LLTTLHYADG LDTPKDRAFR LSYAKTYKLQ PDVYAVQGYD AAQMLAAGLK AAGGDFSKRE VLIKGMEQAK IDSPRGAFTL SKAHNPVQDI YLRKVENKEN KMVSVAAKGL ADPARGCRL
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